structural origin of eloa toxicity implication for hamlet type protein complexes with oleic ac
Báo cáo khoa học: Polysaccharide binding sites in hyaluronate lyase – crystal structures of native phage–encoded hyaluronate lyase and its complexes with ascorbic acid and lactose docx
... same side of the surface in close proximity to the interacting residues and were interacting with the actual substrate Ascorbic acid binding Ascorbic acid (Fig 1A) inhibits the activity of HylP2 ... structure of the complex of HylP2 with ascorbic acid shows that three molecules of ascorbic acid bind to HylP2 trimer at each one of the three concave surfaces (Fig 4) At site 1, ascorbic acid is ... the crystals of HylP2 complex with the HA substrate or its analogue However, with the help of the structures of the native protein and its two complexes with ascorbic acid and lactose, we were...
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Báo cáo khoa học: Structural recognition of an optimized substrate for the ephrin family of receptor tyrosine kinases pot
... equimolar mixture of the 18 amino acids excluding cysteine, and tyrosine In each peptide, one of the X positions was replaced with of 22 residues (one of the 20 unmodified amino acids, pSer or pTyr) ... interactions with the C-terminal lobe, there is still significant affinity of this peptide for EphA3 In line with these findings, and also in agreement with the peptide array data, replacement of ... a low activity EphA3 conformation (2QOQ); orange and blue, two intermediate activity conformations (2QOB and 2GSF); pink, a higher activity conformation (2QO9); red, a high activity conformation...
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Báo cáo khoa học: Inhibition of a-synuclein fibrillization by dopamine analogs via reaction with the amino groups of a-synuclein Implication for dopaminergic neurodegeneration pot
... incubated with mM of DA analogs for 24 h, and then the reaction mixtures were analyzed by means of SEC (B) SDS ⁄ PAGE graph of the fractions from SEC separation of the reaction products of a-Syn with ... et al Reaction of a-synuclein with dopamine analogs Fig Spectrophotometric characterization of the reactions of DA analogs with a-Syn and some amino acids (A) UV-vis spectra of a-Syn with DA, ... spectra of the reactions of a-Syn with quinone and DA (A) Overlay of the 1H-15N HSQC spectra of a-Syn (black) and the reaction product of a-Syn and Q (red) (B) Overlay of the 1H-15N HSQC spectra of...
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Structural characterization of nogo proteins implications for biological functions and moleculedesign of therapeutic applications
... remodeling, interaction with β-amyloid protein converting enzyme, formation/maintenance of the tubular network of the endoplamic reticulum (ER) and so forth Structural study of Nogo should be ... describe these proteins As NMR is more powerful in characterizing disorder than Xray diffraction, with the development of NMR as a structure tool the number of proteins and protein domains with little ... Structural Characterization of NgBR 134 3.6.1 Cloning and expression of NgBR and its dissected domains 136 3.6.2 Bioinformatics characterization 138 3.6.3 Structural characterization of the NgBR...
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Báo cáo khoa học: The 3¢-UTR of the mRNA coding for the major protein kinase C substrate MARCKS contains a novel CU-rich element interacting with the mRNA stabilizing factors HuD and HuR ppt
... luciferase activities measured, normalized to protein concentration of each clone and the average of each construct presented as RLU (Fig 1B) The activity of the reporter gene decreased dramatically with ... the formation of two RNA :protein complexes with identical mobility to those observed with the fulllength 3¢-UTR (C1, C2) were observed with the 52 nt RNA probe To monitor the specificity of protein ... °C for days Complex formation was detectable with 0.8 nM of GST-HuD protein (B) Gel retardation assay was performed with the 52 nt sense CU-rich RNA and GST-HuR; a RNA :protein complex was formed...
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modeling of sensing and transduction for p - type semiconducting
... size of the grain-grain contact a value of around 100 nm (one fifth of the value of the grain size); the obtained values look reasonable for a Fig 10 Simulation of the impact of grain and contact ... the type of conduction at the surface of the metal oxide [14] It is generally thought that the reaction of reducing gases with pre-adsorbed oxygen is responsible for the change in resistance of ... explanation for the low sensor signals of those materials in spite of their high surface reactivity and guidance on how to attempt the improvement of the sensor performance It also explains the origin of...
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Báo cáo hóa học: " Research Article Comparison of OQPSK and CPM for Communications at 60 GHz with a Nonideal Front End" docx
... the impact of inband distortion due to PA nonlinearity on the performance of OQPSK for different values of backoff With a backoff of dB, the performance degradation is only 0.5 dB for a BER of 10−3 ... Infinity backoff 10 12 14 Eb /N0 (dB) 16 18 20 22 Backoff = dB Backoff = dB Figure 16: Impact of PA nonlinearity on BER performance of OQPSK Figure 14: Impact of quantization on the BER performance of ... Impact of ADC nonidealities on BER performance 6.4.1 OQPSK with FDE The impact of the resolution of the ADC in terms of bits is analyzed Simulation results are represented in Figure 14 For a BER of...
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Báo cáo hóa học: " Research Article Comparison of OQPSK and CPM for Communications at 60 GHz with a Nonideal Front End" doc
... the impact of inband distortion due to PA nonlinearity on the performance of OQPSK for different values of backoff With a backoff of dB, the performance degradation is only 0.5 dB for a BER of 10−3 ... Infinity backoff 10 12 14 Eb /N0 (dB) 16 18 20 22 Backoff = dB Backoff = dB Figure 16: Impact of PA nonlinearity on BER performance of OQPSK Figure 14: Impact of quantization on the BER performance of ... Impact of ADC nonidealities on BER performance 6.4.1 OQPSK with FDE The impact of the resolution of the ADC in terms of bits is analyzed Simulation results are represented in Figure 14 For a BER of...
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Báo cáo y học: "A proposed adaptation of the European Foundation for Quality Management Excellence Model to physical activity programmes for the elderly - development of a quality self-assessment tool using a modified Delphi process" ppt
... Physical Activity, Health and Leisure, Faculty of Sports, University of Porto, Porto, Portugal Department of Information Systems, University of Minho, Guimarães, Portugal Department of Physical ... Curricula Platform1 assisted us in this process A list of 63 potential participants was generated, along with key contacts for each This group included 34 PhD scientists and academics (11 in PA for the ... enjoyment and satisfaction [510] One of the most important factors in customer satisfaction is quality of service [1113] Therefore, continual improvements in PA programmes for the elderly are...
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Báo cáo khoa học: Small heat shock protein Hsp27 prevents heat-induced aggregation of F-actin by forming soluble complexes with denatured actin docx
... be obtained by DLS for long actin Stable complexes of small HSP with denatured actin Fig Formation of the complexes of denatured actin with Hsp273D as studied by DLS (A) F-actin (0.5 mgÆmL)1) ... values for native actin filaments or actin aggregates formed upon thermal denaturation of F-actin in the absence of Hsp27-3D Analytical ultracentrifugation of the Hsp27-3D complexes with denatured actin ... demonstrate formation of stable complexes of Hsp27-3D with denatured actin The size of these complexes (average 5940 As already mentioned, the soluble complexes of Hsp27-3D with denatured actin, which...
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Computational methods for identifying conserved protein complexes between species from protein interaction data
... one of the first eukaryotic interactomes that were studied Figure 1.1 – (a) protein- protein interaction, (b) protein- protein interaction network As efforts to get a complete image of the interactome, ... approaches, the approach of modeling protein complexes as dense sub-graphs faces difficulty in having radical detection of complexes from original PPI networks due to the following facts First, protein ... datasets of manually curated protein complexes of human and yeast, we selected pairs of complexes that shared significant fraction of (homologous) proteins For measuring the conservation level of a...
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Computational methods for identifying conserved protein complexes between species from protein interaction data
... one of the first eukaryotic interactomes that were studied Figure 1.1 – (a) protein- protein interaction, (b) protein- protein interaction network As efforts to get a complete image of the interactome, ... approaches, the approach of modeling protein complexes as dense sub-graphs faces difficulty in having radical detection of complexes from original PPI networks due to the following facts First, protein ... datasets of manually curated protein complexes of human and yeast, we selected pairs of complexes that shared significant fraction of (homologous) proteins For measuring the conservation level of a...
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Computational methods for identifying conserved protein complexes between species from protein interaction data
... one of the first eukaryotic interactomes that were studied Figure 1.1 – (a) protein- protein interaction, (b) protein- protein interaction network As efforts to get a complete image of the interactome, ... approaches, the approach of modeling protein complexes as dense sub-graphs faces difficulty in having radical detection of complexes from original PPI networks due to the following facts First, protein ... datasets of manually curated protein complexes of human and yeast, we selected pairs of complexes that shared significant fraction of (homologous) proteins For measuring the conservation level of a...
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Báo cáo khoa học: Structural flexibility of the methanogenic-type seryl-tRNA synthetase active site and its implication for specific substrate recognition pptx
... completion of the first step of the aminoacylation reaction 120 Activity % 100 80 60 40 20 val gly ala cys thr Fig Inhibition of mMbSerRS with noncognate amino acids Activity of wild -type mMbSerRS (black ... 5¢-CCTTTCGATTCCGTGAATTGCAACACTCTCATACCTGTGG 5¢-CGGAATCGAAGCGGTCGACGAGTTCCACAGG 5¢-CCTGTGGAACTCGTCGACCGCTTCGATTCCG 5¢-GAAAAGCAAGAGTTACCCCCGCGTTTATGGCACAGGAAG 5¢-CTTCCTGTGCCATAAACGCGGGGGTAACTCTTGCTTTTC 5¢-GCTTGAGTTCCAGGCTGTGAGCATCAATGGAGATAAGTATC ... al mMbSerRS active site mutants Fig Model of the acceptor end of tRNASer bound in the active site of mMbSerRS The view is focused on the acceptor part of tRNA in the active site of mMbSerRS The...
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An Equilibrium Model of Rare-Event Premia and Its Implication for Option Smirks potx
... with risk aversion is of the form ÀðgþuÞ Ytþ1 , while the component associated with intertemporal substitution is of the form þ LÃ From this, we can see the possibility of, for the purpose of ... slightly different form than that in Equation (D.10), this extra factor could have been taken care of We chose to work with the current form of f, since it was the original form provided by Duffie ... different ways For example, deep-out -of- the-money put options are extremely sensitive to market crashes Options with varying degrees of moneyness therefore provide a wealth of information for us to...
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Báo cáo khoa học: Structural and functional roles for b-strand 7 in the a-crystallin domain of p26, a polydisperse small heat shock protein from Artemia franciscana pdf
... Y116D Primer 5¢-GGACACGTACAAGGAGAATTTCGACGACG-3¢ 5¢-CGTCGTCGAAATTCTCCTTGTACGTGTCC-3¢ 5¢-CACGTACAAAGAGAACGTCGACGACG-3¢ 5¢-CGTCGTCGACGTTCTCTTTGTACGTG-3¢ 5¢-GAGAATTTCGAGCACGATACAGACTCCC-3¢ 5¢-GGGAGTCTGTATCGTGCTCGAAATTCTC-3¢ ... prominent dimer–dimer interface occurs with b-strand of monomer B interacting with loop L5 ⁄ of monomer C, and b-strand of monomer C reacting with L5 ⁄ of monomer B, regions of high similarity between ... trypsinized 24 h after transfection for preparation of protein extract, centrifuged at 1500 g for min, washed with mL of phosphate-buffered saline (NaCl ⁄ Pi) (140 mm NaCl, 2.7 mm KCl, 8.0 mm Na2HPO4,...
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Báo cáo khoa học: Sequences and structural organization of phospholipase A2 genes from Vipera aspis aspis, V. aspis zinnikeri and Vipera berus berus venom Identification of the origin of a new viper population based on ammodytin I1 heterogeneity docx
... amino acids long The mature proteins consisted of 122 amino acids for ammodytin I1, the A and B chains of vaspin and V b berus PLA2, and 121 amino acids for ammodytin I2 The amino-acid sequence of ... AtxACFc (F) AtxACrcc (R) AmlFd (F) Amlrcd (R) CAGGAAACAGCTATGAC CGGAATTCTGAAGGTGGCCCGCC AGGTGACAG CGCGGATCCAATCTTGATGGGGC AGCCGGAGAGG AGGAYTCTCTGGATAGTGG CTCACCACAGACGATWTCC CGGTAAGCCCATAACGCCCA ... 100% identical with that of the acidic subunit of PLA2-I from V a zinnikeri [17] The deduced amino-acid sequence of the V b berus anticoagulant PLA2 protein was identical with that of the PLA2 purified...
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Báo cáo Y học: Monitoring the structural consequences of Phe12 fi D-Phe and Leu15 fi Aib substitution in human/rat corticotropin releasing hormone Implications for design of CRH antagonists pdf
... goal of our study is the solution structure determination of a CRH analogue devoid of any agonist activity, a fact particularly relevant to the further design and development of CRH antagonists with ... residues Analysis of the distribution of the electrostatic potential on the surface of the molecule reveals the ampiphilic character of the helix (Fig 4A) Schematic representation of the charge distribution ... structure and this conformation characterizes the biologically active form of the peptide [41] TFE assists amphipathic peptides with high helical propensity, such as CRH, to reach the maximum helical...
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Báo cáo khoa học: "INIGATION OF PROCESSING STRATEGIES FOR THE STRUCTURAL ANALYSIS OF ARGOMF" pdf
... to each class forever (B0:) if NEW evidence for L then (Sl:) if no sons of L are evidence for NEW then /* just test lastson for evidence */ (BII:) attach NEW below L (Bl2:) set L to NEW exit forever ... (B21:) attach all sons of L which are evidence for NEW below NE~ /* attach lastson; bump ptr to lastson */ /* back I and keep testing for evidence */ (B22:) attach NE~ below L exit forever loop ... claim for L) 2al If L is evidence, keep popping off elements of the stack that are also sons and push the resulting tree onto the stack 2b) Otherwise, push ~ onto the stack In short, search for...
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- normalization of chronic toxicity data for a c12 9 ao
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