... FEBS 26 41 Detection systemfor protein–protein interactions N Fukuda et al Table Primers used for construction of plasmids and yeast strains Primer number 10 11 12 13 14 15 16 17 18 19 20 21 22 ... sequence of yeast Gc at the Table Yeast strains used in this study Strain Genotype Reference BY47 41 MC-F1 BWG 211 8 BZG 211 8 BFG 211 8 BZFG 211 8 BFG2Z18-WT BFG2Z18-K35A BFG2Z18-I31A MATa his3D1 ura3D0 leu2D0 ... data for 10 000 cells 1 indicates BWG 211 8 (the constructed ste18D strain), and ‘2’ indicates MC-F1 (the STE18-intact strain) background signal generation was also shown for the growth inhibition...
... cytoplasmic 95 11 1 11 7 12 0 P P 15 4 16 0 19 4 P P Zinc finger C2H2 type domain LIM zinc-binding domain Protein kinase C phosphorylation site P F1 10 41 120 15 4 19 4 aa Actin F2 GST F3 F4 F1 F2 F3 ... staining was performed as described previously [12 , 31] The cells were stained for 20 with TRITC ⁄ phalloidin (1 lgÆmL )1) in blocking solution (1% BSA and 0 .1% Triton X -10 0 in NaCl ⁄ Pi) in the dark ... domain is sufficient to interact with actin, the LIM domain was functionally destroyed by replacing cysteine with serine in either domain (mLIM1) or (mLIM2), and an invitro GST pull-down assay was...
... Narumiya, S (19 96) Rhotekin, a new putative target for Rho bearing homology to a serine/threonine kinase, PKN, and rhophilin in the rho-binding domain J Biol Chem 2 71, 13 556 13 560 15 Ishizaki, ... Lim, L (19 95) A novel serine/ threonine kinase binding the Ras-related RhoA GTPase which Ó FEBS 2002 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 A new activated RhoB binding protein modulated ... by PCR-based methods As shown in Fig 1, the human protein has 87% identity with the dog protein Between amino acids 35 and 12 2, p76RBE contains an HR1-Rho-binding domain, and between amino acids...
... phosphatidylinositol kinase PKA protein kinase A PKD Protein kinase D PLD phospholipase D PM plasma membrane PMSF phenyl-methyl-sulfonyl fluoride POMC Proopiomelanocortin PP1γ protein phosphotase γ ... proteins were identified in eukaryotic model systems and classified into subfamilies There are 15 mammalian Sec7-domaincontaining proteins assigned into two major classes and further subclasses based ... binding of a cargo protein with a motor protein dynein (Tai et al., 19 99); or mediated via adaptor proteins (Nakagawa et al., 2000), or binding to a lipid domain (Noda et al., 20 01) Protein kinase...
... similarity in the catalytic domain to protein kinase C186 ,18 8 The best characterized member of PRKs is PRK1, also known as PKN (protein kinase N )18 5 or PAK1 (protease-activated protein kinase 1) 183 ... protein kinase activity of PRK 118 7 In 19 96, it was found that the small GTPase RhoA binds to PRK1 in a GTP-dependent manner2 01In addition, PRK1 can interact with RhoB and RhoC2 01 PRK1 has been ... shown in Figure1 .1 Figure 1.1 Major members of the serine/threonine kinase family and tyrosine kinase family (adapted from Hanks S.K, et al.34) In addition to serine/threonine kinases and tyrosine...
... calcium-binding domain of the protein (A) Schematic drawing of the recombinant proteins Six GST-fused recombinant proteins containing the three distinctive domains of tandem repeat (R1), the Glu-rich ... was incubated first in 5% fat-free dried milk in NaCl ⁄ Tris for h, and then in the same solution containing the antibodies (1 : 10 00 dilution) overnight After washing the membrane twice (10 mins ... Ca2+-binding proteins, calsequestrin, calmodulin, troponin C, and S 10 0, with the cationic carbocyanine dye ‘Stains-all’ J Biol Chem 258, 11 267– 11 273 Maruyama K, Mikawa T & Ebashi S (19 84) Detection...
... Journal compilation ª 2 011 FEBS 2363 A domain of fibronectin-binding protein B A F M Burke et al RU 10 0 A N 80 Response 40 GBD 9 10 11 12 13 14 607 12 65 12 66 19 08 V 15 10 11 12 C 19 18–2477 B rFnBPB309–480 ... the binding sites for the A domain of FnBPB in Fn A domain of fibronectin-binding protein B 10 0 80 60 40 20 0 10 15 20 Cation conc (mM) 25 30 Fig Inhibition of rFnBPB163–480 binding to fibrinogen ... mechanisms are involved in the binding of the A domain of FnBPB to the two ligands A domain of fibronectin-binding protein B rFnBPB163–480 WT 30 20 10 rFnBPB163–480 N 312 A/F 314 A 10 –20 –30 50 10 0 15 0 200...
... 2 71) 12 85 Table S cerevisiae strains and plasmids used in this study Characteristics Yeast strains MB1 TG1 MR349 AR1 YHUM 214 YHUM 216 MR1 61 MR 211 MR298 AR2 MR287 AR3 AR4 Source CEN.PK2; MATa ras2::kanMX ... protein Cells were fixed in 70% ethanol for DAPI staining and imaged as described in Experimental procedures Fig In uence of Sut2p on invasive growth, FLO 11 expression and Ras protein level in R1278b ... Dras1 Dras2 the Dras2 strain was transformed with a low copy URA3selectable plasmid construct encoding RAS2, prior to deletion of RAS1 In addition, this mutant strain carried SUT2 on a LEU2 plasmid...
... Drosophila, encodes a protein with zinc-binding domains Proc Natl Acad Sci USA 87, 211 2– 211 6 14 Tripoulas N, LaJeunesse D, Gildea J & Shearn A (19 96) The Drosophila ash1 gene product, which is ... changes in chromatin composition [19 ,20] As DIDO1 associates with chromatin in general, and not only in centromeric regions, chromatin instability is the most probable explanation for the lagging ... simultaneously to maintain transcription The PHF3 protein was recovered in initial analyses and also contains a TFS2M domain showing the same architecture as the DIDO1 long isoform, although lacking the...
... ARE-containing mRNAs [68] and has been associated with the activation of c-Jun N-terminal kinase (JNK) [69] Similarly, activation of MAP kinase-activated protein kinase has been associated with the ... Physiol 279, 16 11 16 20 Blackshear, P.J (19 93) The MARCKS family of cellular protein kinase C substrates J Biol Chem 268, 15 01 15 04 Aderem, A (19 95) The MARCKS family of protein kinase C substrates ... 465– 470 11 Antic, D & Keene, J (19 98) Messenger ribonucleoprotein complexes containing human ELAV proteins: interactions with cytoskeleton and translational apparatus J Cell Sci 11 1, 18 3 19 7 12 ...
... clones obtained Clone (12 ) (2) (1) (1) (2) (1) (1) (1) (1) 10 (7) 11 (12 ) Protein Function Abl-interactor-2 (Abi2) CASK EphA2 L1CAM Myosin IB Nck1 Neurexin Adaptor protein Scaffold protein Receptor ... (MI:0 018 ) MINT -703 4 617 : Caskin1 (uniprotkb:Q8VHK2) physically interacts (MI:0 915 ) with CASK (uniprotkb:P07498) by two hybrid (MI:0 018 ) MINT -703 4748: Caskin1 (uniprotkb:Q8VHK2) physically interacts ... disorder in scaffold proteins l l l l l l l l l MINT -703 4579: Caskin1 (uniprotkb:Q8VHK2) physically interacts (MI:0 915 ) with ABI2 (uniprotkb:Q9NYB9) by two hybrid (MI:0 018 ) MINT -703 4720: Caskin1 (uniprotkb:Q8VHK2)...
... in ASW, respectively DRUs after each washing process were as follows: first loading on Au in ASW, 11 74 RU; second loading on Au in ASW, 11 77 RU; third loading on Au in ASW, 11 82 RU; first loading ... corresponding to each single peptide with molecular masses of 311 2.36 Da (Gly19Lys 51, predicted molecular mass, 311 1.47 Da) and 13 98.6 Da (Ala1-Lys14, predicted molecular mass, 13 97 .70 Da) This ... 10 .00 8.00 18 .00 9.00 4.00 27.00 1. 00 1. 00 21. 00 18 .00 4.00 2.00 0.00 14 .00 0.00 17 .00 5.00 10 .00 4.00 0.00 14 .8c – 19 .30 11 .2d – 29.60 1. 10 2.30 21. 20 18 .20 4.90 ND 0.60 14 .60 0.00 14 .60 5.20...
... Pi for 20 min, quenched in 50 mm NH4Cl in NaCl ⁄ Pi for 15 min, and permeabilized in 0 .1% (w ⁄ v) Triton X -10 0 in NaCl ⁄ Pi for After blocking with 0 .1% (w ⁄ v) gelatin in NaCl ⁄ Pi for 30 min, ... [a Bro1 domain-containing protein with a thioester-linkage site of isoprenoid lipid (CAAX motif, C standing for cysteine, A for generally aliphatic amino acid, and X for any amino acid)] in this ... for testing protein prenylation invitro and in vivo BMC Biochem 7, doi :10 .11 86 /14 712 0 91- 7-6 Winter-Vann AM & Casey PJ (2005) Post-prenylationprocessing enzymes as new targets in oncogenesis Nat...