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ACKNOWLEDGEMENTS I would like to express my sincere gratitude to my supervisor Dr. Theresa Tan and cosupervisor Associate Professor Leow Chon Kar for their invaluable supervision, support and encouragement throughout the course of my study. I would also thank Professor Sit Kim Ping for her concern for my study. My heartfelt thanks also go to Loh Chien Yuen, Qu Bin, Sherry Ngo, Lai Liqi, Low Teck Yew, Lee Mui Khin, other lab mates and staffs of the Department of Biochemistry for their technical assistance, helpful discussions and suggestions. I also wish to thank the head of the Department of Biochemistry for allowing me to carry out my research in the department and National University of Singapore for the award of the research scholarship. Last but not the least, I would thank my husband, son and parents for their understanding and support throughout my study. CELLULAR CHANGES POST HEPATECTOMY IN CIRRHOTIC VS NORMAL RATS TABLE OF CONTENTS CHAPTER INTRODUCTION 1.1 1.1.1 1.1.2 1.2 1.2.1 1.2.2 1.3 1.3.1 1.3.2 1.3.3 1.3.4 1.3.5 1.4 1.4.1 1.4.2 1.4.2.1 1.4.2.2 1.4.2.3 1.4.2.4 1.4.2.5 1.5 1.5.1 1.5.2 1.5.3 1.5.4 1.5.4.1 1.5.5 1.6 Liver Liver regeneration Partial hepatectomy Experimental model of liver cirrhosis Liver cirrhosis Thioacetamide induced cirrhosis in rat Mitochondria oxidative phosphorylation Complex I Complex II Complex III Cytochrome c oxidase ATP synthase Oxidative stress Reactive oxygen species Antioxidants Glutathione (GSH) Superoxide dismutase (SOD) Glutathione peroxidase Glutathione reductase Catalase Liver regeneration related proteins and genes Cell cycle Priming role of TNF-α and IL-6 in liver regeneration Role of HGF and TGF-α in liver regeneration Role of cyclins, cdks and cdk inhibitors in cell cycle Structure of cdk2, cdk2-cyclin A and cdk2-cyclin A-p27 p53 Objectives of this study 16 17 21 21 21 23 24 25 26 26 27 28 29 29 33 33 34 34 35 35 36 36 37 38 39 40 41 42 CHAPTER MATERIALS AND METHODS 2.1 2.2 2.3 2.4 2.5 Chemicals Induction of cirrhosis Partial hepatectomy Preparation of mitochondria Measurement of protein concentration 44 45 45 46 46 2.6 2.7 2.8 2.9 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.17.1 2.17.2 2.18 2.18.1 2.18.2 2.19 Determination of the respiratory control and ADP/O ratios Mitochondrial NADH-cytochrome c reductase activity Mitochondrial succinate-cytochrome c reductase activity Mitochondrial cytochrome c oxidase activity Mitochondrial ATPase activity Hepatic and mitochondrial glutathione determination Mitochondrial and cytosolic superoxide dismutase activity Mitochondrial and cytosolic glutathione peroxidase activity Mitochondrial and cytosolic glutathione reductase activity Measurement of malondialdehyde Western blotting ELISA TNF-α ELISA IL-6 ELISA mRNA analysis RNA isolation RT-PCR Statistical analysis 47 47 48 48 49 49 50 50 51 51 52 54 54 55 56 56 57 59 CHAPTER INDUCTION OF CIRRHOSIS 3.1 3.2 3.3 3.4 Introduction Thioacetamide induced liver cirrhosis Effects on mitochondrial function and GSH levels Conclusions 61 62 62 62 CHAPTER MITOCHONDRIA FUNCTION 4.1 4.2 4.3 4.3.1 4.3.2 4.3.3 4.3.4 4.3.5 4.4 Introduction Respiratory enzymes activities in normal and cirrhotic livers Changes in mitochondrial respiratory enzymes and ATPase following Hepatectomy SCCR activity NCCR activity CCO activity Respiratory control and P/O ratios Mitochondrial ATPase activity Conclusions 66 68 69 69 69 72 72 72 79 CHAPTER OXIDATIVE STRESS 5.1 5.2 5.3 Introduction Mitochondrial and cytosolic antioxidant capacity in normal and cirrhotic livers Changes in mitochondrial and cytosolic antioxidant capacity following partial Hepatectomy 80 82 84 5.3.1 5.3.2 5.3.3 5.3.4 5.3.5 5.3.6 5.4 Mitochondrial and hepatic GSH level Mitochondrial and cytosolic superoxide dismutase activity Mitochondrial and cytosolic glutathione peroxidase activity Mitochondrial and cytosolic glutathione reductase activity Mitochondrial and cytosolic catalase expression Mitochondrial lipid peroxidation Conclusions 84 84 89 89 89 96 96 CHAPTER EXPRESSION PATTERNS OF CYTOKINE, GROWTH FACTOR AND CELL CYCLE-RELATED GENES 6.1 6.2 6.2.1 6.2.2 6.3 6.3.1 6.3.2 6.4 6.4.1 6.4.2 6.4.3 6.4.4 6.5 6.5.1 6.5.2 6.6 6.6.1 6.6.2 6.7 6.8 Introduction Hepatic TNF-α and IL-6 TNF-α level IL-6 level Expression of growth factors HGF mRNA TGF-α mRNA Expression of cyclins Expression of cyclin D1 Expression of cyclin D3 Expression of cyclin E Expression of cyclin A Expression of cdks Expression of cdk4 Expression of cdk2 mRNA of cdk inhibitors p21 mRNA p27 mRNA p53 mRNA Conclusions 98 100 100 100 101 101 101 102 102 102 110 110 110 110 114 114 114 114 118 118 CHAPTER DISCUSSION 7.1 7.2 7.3 7.4 7.5 7.6 Respiratory enzymes activities in normal and cirrhotic livers Changes in mitochondrial respiratory enzymes and ATPase following hepatectomy Mitochondrial and cytosolic antioxidant capacity in normal and cirrhotic livers Changes in mitochondrial and cytosolic antioxidant capacity following partial hepatectomy Expression of cyclins, cdks and cdk inhibitors in normal and cirrhotic livers Changes in expression of cyclins, cdks and cdk inhibitors after PH 120 121 122 124 126 126 7.7 7.8 7.9 Expression of cytokines and growth factors in normal and cirrhotic livers Changes in expression of cytokines and growth factors following PH Conclusions 128 129 132 Abstract For many liver malignancies, major hepatectomy is the main course of therapy. Although a normal liver has a tremendous capacity for regeneration, liver hepatectomy in humans is usually carried out on a diseased liver and in such instances, liver regeneration takes place in a cirrhotic remnant. As the demand of energy increases during liver regeneration, the mitochondria must play an important role. Cytokines and growth factors also play important roles in liver regeneration. Hepatocytes need to be primed before they are competent to respond to growth factors and proliferate. Cytokines such as TNF-α and IL6 can prime the hepatocytes, making them go from quiescent phase to G1 phase. Following this, the growth factors HGF and TGF-α act as mitogens and the hepatocytes respond by progressing through the cell cycle resulting in cell division. Cyclins such as cyclin D1, D3, E and A and their respective cyclin-dependant kinase partners play important roles at different phases of the cell cycle and regulate progress through the cell cycle. The activities of cdks can be inhibited by cdk inhibitors such as p21 and p27. This study aims to investigate how mitochondrial respiratory function, antioxidant capacity, cytokines, growth factors, cyclins, cdks and cdk inhibitors expressions change following partial hepatectomy of cirrhotic livers. Cirrhosis was induced in male WistarFurth rats by administration of thioacetamide. NADH-cytochrome c reductase activity, glutathione peroxidase activity and mitochondrial GSH levels were all significantly lowered in cirrhotic livers and in the cirrhotic remnants up to 72 h after 70% hepatectomy when compared to the corresponding controls. Lower respiratory control ratios with succinate as substrate were also observed at h till 48 h post-hepatectomy. At 24 h postPH, higher levels of lipid peroxidation were observed. Cirrhotic rats had decreased cytosolic IL-6 level till 72 h post-hepatectomy. Cirrhotic rats also had lower expressions of cyclin D1 from 24 h to 72 h; cyclin D3 at 24 h; cdk4 from h to 72 h; cylcin E till 72 h; cyclin A and cdk from 24 h to 48 h post-hepatectomy. But the mRNA levels of p21 at h and p27 from h to 48 h were up regulated in cirrhotic rats. In conclusion, when compared to the controls, cirrhotic livers have diminished oxidative phosphorylation capabilities due to changes in NADH-linked and FADH2-linked respiration as well as impaired antioxidant defenses following partial hepatectomy. Cirrhotic livers also have diminished cytokines, cyclins, cdks expression but increased cdk inhibitors expression. All these factors, if critical, could then impede liver regeneration. Keywords: partial hepatectomy, cirrhosis, mitochondria, cytokines, growth factors, cell cycle. Abbreviations ADP Adenosine 5’-diphosphate AP-1 Activated protein ATP Adenosine 5’-triphosphate CAK Cyclin-dependent kinase activation kinase CCO Cytochrome c oxidase cdk cyclin-dependent kinase Cip Cdk interacting protein Cyto Cytosolic ECM Extracellular matrix EDTA Ethylenediaminetetraacetic acid EGF Epidermal growth factor ELISA Enzyme-linked immunosorbent assay GPx Glutathione peroxidase GRd Glutathione reductase GSH Glutathione GSSG Glutathione disulfide GST Glutathione S-transferases HGF Hepatocyte growth factor HRP Horseradish peroxidase HSC Hepatic stellate cells Kip Kinase inhibitory protein IgG Immunoglobulin G IL-6 Interleukin-6 Ink4 Inhibitor of cdk4 MCB Monochlorobimane MDA Malondialdehyde Mt Mitochondrial NADH Reduced nicotinamide adenine dinucleotide NCCR NADH-cytochrome c reductase NF-κB Nuclear factor kappa B PCNA Proliferating cell nuclear antigen PH Partial hepatectomy pRb Retinoblastoma protein RCR Respiratory control ratio ROS Reactive oxygen species RT-PCR Reverse transcription-polymerase chain reaction SCCR Succinate-cytochrome c reductase SDS Sodium dodecyl sulfate SOD Superoxide dismutase STAT3 Signal transducers and activators of transcription TBA Thiobarbituric acid TBARS Thiobarbituric acid-reacting substances TBS-T Tris buffered saline-tween TEMED N, N, N’, N’-tetra-methylethylenediamine TGF Transforming growth factor TMB Tetramethyl-benzidine TNF-α Tumor necrosis factor-α TNFR Tumor necrosis factor-α receptor 10 References Abrahams JP, Leslie AG, Lutter R, Walker JE. 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(broken lines) following partial hepatectomy 76 Fig 4.2D Changes in liver mitochondrial ADP/O ratio of control (solid line) and cirrhotic rats (broken lines) following partial hepatectomy 77 Fig 4.3 Mitochondrial ATPase activities from control (solid line) and cirrhotic 11 rats (broken lines) after partial hepatectomy 78 Fig 5.1A Mitochondrial glutathione (GSH) content in control (solid line) and cirrhotic. .. PH on cyclin D3 expression in healthy rats (white bars) and cirrhotic rats (black bars) 109 Fig 6.8 Effect of PH on cyclin E expression in healthy rats (white bars) and cirrhotic rats (black bars) 111 Fig 6.9 Effect of PH on cyclin A expression in healthy rats (white bars) and cirrhotic rats (black bars) 112 Fig 6.10 Effect of PH on cdk4 expression in healthy rats (white bars) and cirrhotic rats (black... cirrhotic rats (broken lines) after partial hepatectomy 70 Fig 4.1B Time-dependent changes of NADH-cytochrome c reductase (NCCR) activities from control (solid line) and cirrhotic rats (broken lines) after partial hepatectomy 71 Fig 4.1C Time-dependent changes of cytochrome c oxidase (CCO) activities from control (solid line) and cirrhotic rats (broken lines) after partial hepatectomy 73 Fig 4.2A Changes. .. expression in normal and cirrhotic rats after partial hepatectomy 95 Fig 5.6 Mitochondrial TBARS level from control (solid line) and cirrhotic rats (broken lines) after partial hepatectomy 97 Fig 6.1 Hepatic TNF-α concentration after PH on healthy rats (white bars) and cirrhotic rats (black bars) 103 Fig 6.2 Hepatic IL-6 concentration after PH on healthy rats (white bars) and cirrhotic rats (black... capacity was also observed in cirrhotic rats with lower proliferating cell nuclear antigen labeling index and expression of G1 regulatory cell cycle-related proteins (Yanagida H et al, 2005; Ozdogan M et al, 2005; Kato A et al, 2005) In this study, we aim to examine the differences in the responses of normal and cirrhotic livers to partial hepatectomy in relation to the factors influencing liver regeneration... reductase (GRd) activity from control (solid line) and cirrhotic rats (broken lines) after partial hepatectomy 92 Fig 5.4B Cytosolic glutathione reductase (GRd) activity from control (solid line) and cirrhotic rats (broken lines) after partial hepatectomy 93 Fig 5.5A Western blot analysis of mitochondrial catalase expression in normal and cirrhotic rats after partial hepatectomy 94 Fig 5.5B Western blot analysis... activity from control (solid line) and cirrhotic rats (broken lines) after partial hepatectomy 88 Fig 5.3A Mitochondrial glutathione peroxidase (GPx) activity from control (solid line) and cirrhotic rats (broken lines) after partial hepatectomy 90 Fig 5.3B Cytosolic glutathione peroxidase (GPx) activity from control (solid line) and cirrhotic rats (broken lines) after partial hepatectomy 91 Fig 5.4A Mitochondrial... Amino acids Lipids Fatty acids Cholesterol Lipidproteins Fat-soluble vitamins Water-soluble vitamins Inactivation of various substances Toxins Steroids Other hormones Synthesis of plasma proteins Acute-phase proteins Albumin Clotting factors Steroid-binding and other hormone-binding proteins Immunity Kupffer cells 18 Growth Factors (HGF, TGFα) S Cytokines TNF IL-6 G0 G1 G2 M Fig 1.1 Multistep model of... (M) phase During interphase, the cell synthesizes RNA, produces proteins and grows in size Interphase can be divided into Gap 0 (G0), Gap 1 (G1), synthesis (S) phase and Gap 2 (G2) In G0, the cell leaves the cycle and quits dividing In G1, the cell increases in size, produces RNA and synthesizes proteins There is a checkpoint in G1 to ensure that the cell is ready for DNA synthesis During S phase, . their understanding and support throughout my study. 1 CELLULAR CHANGES POST HEPATECTOMY IN CIRRHOTIC VS NORMAL RATS TABLE OF CONTENTS CHAPTER 1 INTRODUCTION . capacity following partial hepatectomy 124 7.5 Expression of cyclins, cdks and cdk inhibitors in normal and cirrhotic livers 126 7.6 Changes in expression of cyclins, cdks and cdk inhibitors. (solid line) and cirrhotic rats (broken lines) following partial hepatectomy 75 Fig 4.2C Changes in liver mitochondrial respiratory control ratio (RCR) of control (solid line) and cirrhotic rats