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Application of poly ß hydroxybutyrate accumlating bacteria in crustacean larviculture

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Cấu trúc

  • CONTENTS

  • CHAPTER 1

    • 1.1 The importance of aquaculture

    • 1.2 The immediate goals of the industrial aquaculture

    • 1.3 Importance of crustacean aquaculture

    • 1.4 Giant freshwater prawn (Macrobrachium rosenbergii)

      • 1.4.1 Distribution, taxonomy and biology

      • 1.4.2 The status of Macrobrachium rosenbergii culture

      • 1.4.3 Macrobrachium rosenbergii culture practices

      • 1.4.4 Disease in M. rosenbergii aquaculture

    • 1.5 The brine shrimp Artemia

      • 1.5.1 Biology and ecology of Artemia

      • 1.5.2 The role of Artemia in aquaculture

        • 1.5.2.1 The supply and demand of cysts

        • 1.5.2.2 Artemia as live food

        • 1.5.2.3 Risks associated with the use of Artemia as live food in aquaculture

        • 1.5.2.4 Artemia as a model test organism

    • 1.6 Measures to control diseases in aquaculture

      • 1.6.1 Water control

      • 1.6.2 Immunostimulation and vaccination

      • 1.6.3 Quorum sensing interference

      • 1.6.4 Probiotics and prebiotics

      • 1.6.5 Alcaligenes spp. and Bacillus spp. as probiotics

    • 1.7 Poly-β-hydroxybutyrate as antimicrobial agent in aquaculture

      • 1.7.1 The group of polyhydroxyalkanoates

      • 1.7.2 The metabolism of polyhydroxyalkanoates

      • 1.7.3 The production and cost of polyhydroxyalkanoates

      • 1.7.4 The degradation of polyhydroxyalkanoates

      • 1.7.5 The potential of poly-β-hydroxybutyrate as an antimicrobial agent for aquaculture application

      • 1.7.6 Obstacles for the application of PHB in aquaculture

    • 1.8 Thesis objectives and outline

  • CHAPTER 2

    • SECTION 1

      • 2.1.1 Introduction

      • 2.1.2 Materials and methods

        • 2.1.2.1 Origin of Macrobrachium prawn larvae

        • 2.1.2.2 Experimental feed preparation

          • 2.1.2.2.1 Axenic hatching of Artemia franciscana

          • 2.1.2.2.2 PHB-accumulated Alcaligenes eutrophus and PHB particles preparation

          • 2.1.2.2.3 Enrichment of axenic Artemia nauplii with PHB-accumulated A. eutrophus and crystalline PHB particles

        • 2.1.2.3 Experimental design

        • 2.1.2.4 Analyses

          • 2.1.2.4.1 Measurement of PHB content in enriched Artemia nauplii

          • 2.1.2.4.2 Measurement of PHB content in enriched and purged Artemia nauplii

          • 2.1.2.4.3 M. rosenbergii larval survival

          • 2.1.2.4.4 Larval stage index (LSI)

          • 2.1.2.4.5 Bacteria in the gut of M. rosenbergii larvae

          • 2.1.2.4.6 Statistics

      • 2.1.3 Results

        • 2.1.3.1 PHB content in Artemia nauplii

        • 2.1.3.2 Experiment 1: survival and growth test

          • 2.1.3.2.1 Effect of feeding PHB enriched Artemia nauplii on survival and growth of M. rosenbergii larvae

          • 2.1.3.2.2 Effect of feeding PHB enriched Artemia nauplii on the gut microbiota of M. rosenbergii larvae

        • 2.1.3.3 Experiment 2: Challenge test

          • 2.1.3.3.1 Effect of feeding PHB enriched Artemia nauplii on the survival of M. rosenbergii larvae challenged with V. harveyi BB120

          • 2.1.3.3.2 Effect of feeding PHB enriched Artemia nauplii on the number of vibrios in the gut of M. rosenbergii larvae challenged with V. harveyi BB120

      • 2.1.4 Discussion

    • SECTION 2

      • 2.2.1 Introduction

      • 2.2.2 Materials and methods

        • 2.2.2.1 Origin of Macrobrachium prawn larvae

        • 2.2.2.2 Axenic hatching of Artemia franciscana

        • 2.2.2.3 Seed preparation of Alcaligenes eutrophus

        • 2.2.2.4 A. eutrophus H16 preparation for feeding and PHB measurement

        • 2.2.2.5 Enrichment of axenic Artemia nauplii with A. eutrophus as feed for M. rosenbergii larvae

        • 2.2.2.6 Experimental design

        • 2.2.2.7 Analyses

          • 2.2.2.7.1 Cell dry weight (CDW)

          • 2.2.2.7.2 Measurement of PHB content in A. eutrophus and enriched Artemia nauplii

          • 2.2.2.7.3 Artemia nauplii and M. rosenbergii larval survival

          • 2.2.2.7.4 Bacteria in the gut of M. rosenbergii larvae

        • 2.2.2.8 Statistics

      • 2.2.3 Results

      • 2.2.4 Discussion

  • CHAPTER 3

    • 3.1 Introduction

    • 3.2 Materials and methods

      • 3.2.1 Axenic cysts of Artemia franciscana

      • 3.2.2 Bacillus sp. LT12 preparation

      • 3.2.3 Experimental design

      • 3.2.4 Hatching success of Artemia cysts in experiment 1

      • 3.2.5 Carbon and nitrogen analyses of AHMA samples from experiment 1

        • 3.2.5.1 Glycerol

        • 3.2.5.2 Glycogen

        • 3.2.5.3 Trehalose

        • 3.2.5.4 Total organic carbon (TOC)

        • 3.2.5.5 Total nitrogen (TN)

      • 3.2.6 OD of Bacillus LT12 in experiment 2

      • 3.2.7 Verification of axenity during hatching in experiment 1 and experiment 2

      • 3.2.8 Statistics

    • 3.3 Results

      • 3.3.1 Hatching success

      • 3.3.2 Glycerol, glycogen and trehalose content in the AHMA of Artemia

      • 3.3.3 Total organic carbon content in the hatching medium of Artemia

      • 3.3.4 Total nitrogen content in the hatching medium of Artemia

      • 3.3.5 Growth of Bacillus sp. LT12 in axenic hatching medium of Artemia (Experiment 2)

    • 3.4 Discussion

  • CHAPTER 4

    • 4.1 Introduction

    • 4.2 Materials and methods

      • 4.2.1 Source of Bacillus strains and growth conditions

      • 4.2.2 Axenic hatching medium and sterile nauplii of Artemia franciscana

      • 4.2.3 Preparation of Bacillus strains for the experiments

      • 4.2.4 Experimental design

      • 4.2.5 Analysis

        • 4.2.5.1 Survival and total length of Artemia nauplii

        • 4.2.5.2 Cell dry weight (CDW) of Bacillus sp. LT12

        • 4.2.5.3 Measurement of PHB content in Bacillus sp. LT12

        • 4.2.5.4 Statistics

    • 4.3 Results

      • 4.3.1 Experiment 1 (Selecting Bacillus strains)

        • 4.3.1.1 Survival of Artemia nauplii fed the different Bacillus strains as a sole food

        • 4.3.1.2 Total length (TL) of Artemia nauplii

        • 4.3.1.3 PHB content of Bacillus sp. LT3 and LT12 cultured in LB (12 g/L salinity)

      • 4.3.2 Experiment 2 (In vivo challenge tests)

        • 4.3.2.1 PHB content of Bacillus sp. LT12 cultured in LB, AHMA16 and AHMA20 medium

        • 4.3.2.2 Effect of feeding Bacillus sp. LT12 cultured in LB, AHMA16 or AHMA20 medium on the survival of Artemia nauplii in in vivo challenge test with Vibrio campbellii LMG21363

    • 4.4 Discussion

  • CHAPTER 5

    • 5.1 Introduction

    • 5.2 Materials and methods

      • 5.2.1 Origin of Macrobrachium prawn larvae and nursing conditions

      • 5.2.2 Experimental live food preparation

      • 5.2.3 Experimental design

      • 5.2.4 Larval rearing procedure and challenge test

      • 5.2.5 Analyses

        • 5.2.5.1 Cell density of Bacillus LT12

        • 5.2.5.2 Cell dry weight (CDW) of Bacillus LT12

        • 5.2.5.3 Measurement of PHB content in Bacillus LT12 and Artemia nauplii

        • 5.2.5.4 M. rosenbergii larval survival

        • 5.2.5.5 TCBS plate counts of bacteria in the gut of M. rosenbergii larvae

        • 5.2.5.6 Statistics

    • 5.3 Results

      • 5.3.1 Experiment 1

      • 5.3.2 Experiment 2

    • 5.4 Discussion

  • CHAPTER 6

    • 6.1 General discussion

      • 6.1.1 The importance of the poly-β-hydroxybutyrate form for application at the larval stage

      • 6.1.2 Reuse of Artemia hatching medium to culture PHB-accumulating bacteria

      • 6.1.3 The economics and sustainability of reusing Artemia hatching medium for the production of PHB accumulating bacteria

      • 6.1.4 The proposed model for application of amorphous poly-β-hydroxybutyrate on crustacean larviculture in the future

    • 6.2 General conclusions

  • APPENDIX A

  • REFERENCES

  • SUMMARY

  • SAMENVATTING

  • CURRICULUM VITAE

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