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  • INFD01_01

    • Infectious Diseases 1 Introduction

    • Course Objectives

    • Bacterial structure 1

    • Gram stain

    • Bacterial structure 2

    • Bacteria with unusual cell walls

  • INFD01_02

    • Bacterial growth 1

    • Bacterial growth 2

  • INFD01_03

    • Bacterial genetics

  • INFD01_04

    • Endotoxin (LPS)

    • Exotoxin 1

    • Exotoxin 2

    • Exotoxin 3

  • INFD02_01

    • Infectious Diseases 2 Introduction

    • Culture of Bacteria

    • Systemic Infectious Diseases

  • INFD02_02

    • Pneumonia

  • INFD02_03

    • Pharyngitis

    • Epiglottitis

    • Otitis

  • INFD02_04

    • Gastroenteritis and Food Poisoning 1

    • Gastroenteritis and Food Poisoning 2

  • INFD02_05

    • Urinary Tract Infections

  • INFD02_06

    • Musculoskeletal Infections

  • INFD02_07

    • Meningitis

  • INFD02_08

    • Sexually Transmitted Diseases

  • INFD03_01

    • Infectious Diseases 3 Introduction

    • Gram Positives

    • Gram Positive Cocci 1

    • Cluster Cocci

    • Gram Positive Cocci 2

    • Catalase + in CGD

    • Protein A

  • INFD03_02

    • Staphylococcus aureus

    • Staphylococcus epidermidis

  • INFD03_03

    • Streptococcus Species

    • Alpha-Hemolytic Streptococcus

    • Streptococcus pneumoniae

    • Viridans Streptococci

    • Beta- and Gamma-Hemolytic Streptococcus

    • Streptococcus 1

    • Subacute Endocarditis

    • Streptococcus 2

  • INFD03_04

    • Non-Spore-Forming Aerobic Gram + Rods

    • Spore-Forming Aerobic Gram + Rods

    • Anthrax

    • Spore-Forming Anaerobic Gram + Rods

    • Non-Spore-Forming Gram + Rods

  • INFD04_01

    • Infectious Diseases 4 Introduction

  • INFD04_01b

    • Gram negative cocci 1

    • Neisseria

    • Gram Negative Cocci 2

  • INFD04_02

    • Coccobacilli

  • INFD04_03

    • MacConkey Agar

  • INFD04_04

    • Non-Lactose Fermenting Bacteria

  • INFD04_05

    • Typhoid Fever

    • Escherichia coli

    • Yersinia

    • Helicobacter pylori

    • Vibrio sp. vs Campylobacter jejuni

    • Legionella pneumophila

    • Klebsiella pneumoniae

    • Pseudomonas aeruginosa

    • Other Gram Negatives

  • INFD05_01

    • Infectious Diseases 5 Introduction

    • Mycobacteria

    • Mycobacterium tuberculosis

    • Caseous Necrosis

    • Ghon Complex

    • Mycobacterium avium-intracellulare

    • Leprosy

  • INFD05_02

    • Mycoplasma pneumoniae

  • INFD05_03

    • Spirochetes

    • Leptospirosis

    • Lyme Disease

    • Yaws

    • Syphilis

  • INFD05_04

    • Zoonotic Diseases

  • INFD05_05

    • Rickettsiae

    • Rickettsial Diseases

    • Chlamydiae 1

    • Chlamydiae 2

    • Chlamydia trachomatis

  • INFD06_01

    • Infectious Diseases 6 Introduction

    • General Characteristics 1

    • Conidia of Sporothrix

    • General Characteristics 2

    • Forms of Fungi

  • INFD06_02

    • Cutaneous Mycoses

    • Tinea corporis vs versicolor

  • INFD06_02b

    • Sporotrichosis Lymphangitis

  • INFD06_03

    • Systemic Mycosis

  • INFD06_04

    • Histoplasmosis

  • INFD06_05

    • Blastomycosis

  • INFD06_06

    • Coccidioidomycosis

    • Paracoccidioidomycosis

  • INFD06_07

    • Candida albicans

    • Aspergillosis

    • Cryptococcus neoformans

    • Pneumocystis jirovecii

    • Mucormycosis

  • INFD07_01

    • Slide Number 1

    • Protozoa vs Helminths

  • INFD07_02

    • Giardiasis

    • Amebiasis

  • INFD07_03

    • Toxoplasmosis

  • INFD07_04

    • Trypanosoma

    • Leishmaniasis

  • INFD07_05

    • Plasmodium Species

    • Babesiosis

  • INFD07_06

    • Trichomoniasis

  • INFD07_07

    • Helminths (worms)

  • INFD07_08

    • Cestodes (tapeworm) 1

    • Cestodes (tapeworm) 2

  • INFD07_09

    • Hookworms

    • Ascaris lumbricoides

    • Enterobius vermicularis (pinworm)

    • Strongyloides stercoralis

    • Trichinellosis

    • Elephantiasis

    • Toxocara canis

  • INFD07_10

    • Flukes

    • Schistosoma 1

    • Schistosoma 2

  • INFD08_01

    • Infectious Diseases 8 Introduction

    • General Characteristics

  • INFD08_02

    • Viral Replication

  • INFD08_03

    • Cellular Effects

  • INFD08_04

    • Vaccination

  • INFD08_05

    • DNA Viruses

  • INFD08_06

    • Herpesviruses

    • HSV

    • VZV

    • EBV

    • CMV

    • HHV-6: Sixth Disease (Roseola Infantum)

    • HHV-8: Kaposi’s Sarcoma

  • INFD08_07

    • Hepadnavirus and Adenovirus

  • INFD08_08

    • Parvovirus B19: Fifth Disease

  • INFD08_09

    • Papillomavirus, Polyomavirus, Poxvirus

  • INFD08_10

    • Molluscum Contagiosum

  • INFD09_01

    • Infectious Diseases 9 Introduction

    • General Principles

  • INFD09_02

    • Picornaviruses

  • INFD09_03

    • Rotavirus

  • INFD09_04

    • Orthomyxovirus

  • INFD09_05

    • Togavirus

    • Rubella

    • Paramyxoviruses

    • Measles

  • INFD09_06

    • Mumps

  • INFD09_07

    • Rabies

  • INFD09_08

    • Arboviruses

  • INFD09_09

    • Hepatitis

    • Hepatitis B Serology

  • INFD09_10

    • Structure of Genes of HIV

    • HIV Diagnosis

    • Clinical Stages of HIV

  • INFD09_11

    • Prion Diseases

  • INFD09_12

    • ToRCHeS Infections

    • Syphilis

  • INFD10_01

    • Infectious Diseases 10 Introduction

    • Mechanism of Action

    • Definitions

  • INFD10_02

    • Cell Wall Inhibitors

    • Penicillins

    • Cephalosporins 1

    • Cephalosporins 2

    • Other Cell Wall Inhibitors

  • INFD10_03

    • Protein Synthesis Inhibitors

    • Aminoglycosides

    • Tetracyclines

    • Macrolides

    • Other Protein Synthesis Inhibitors

  • INFD10_04

    • Folic Acid Synthesis Inhibitors

  • INFD10_05

    • Fluoroquinolones

  • INFD10_06

    • polymyxins

  • INFD10_07

    • Anti-TB Drugs

  • INFD10_08

    • Mechanisms of Bacterial Drug Resistance

  • INFD11_01

    • Infectious Diseases 11 Introduction

    • Antifungal 1

    • Antifungal 2

    • Antifungal 3

  • INFD11_02

    • Antiparasitic

  • INFD11_03

    • Antiviral

    • Anti-Influenza

    • Antiherpetics

    • Antiretroviral

    • Protease Inhibitors

    • Reverse Transcriptase Inhibitors

    • Fusion Inhibitors

  • INFD11_04

    • Interferons

  • INFD11_05

    • Antibiotics Contraindicated in Pregnancy

Nội dung

Introduction to Bacteriology Lecture I Jonathan Faiwiszewski, M4, UMDNJ INFID1_1 INFID1_1-1 INFID1_11 Course Objectives: To understand the following topics and how they may be tested on USMLE Step 1: - Bacteriology - Infectious Diseases - Stains -Gram positive -Gram negative - Mycology - Parasitology - Virology - Antibiotics INFID1_1-2 INFID1_12 INFID1_1 Kaplan Immunology and Microbiology 2011: Figure II-2-1 FA 2012: 146.2 • FA 2011: 136.2 • FA 2010: 138 ME 3e: 113 INFID1_1-3 Gram Stain • Gram positive—purple • Gram negative—red Commons.wikimedia.org Used with permission FA 2012: 146.2 • FA 2011: 136.2 • FA 2010: 138 ME 3e: 113 INFID1_1-4 Kaplan Immunology and Microbiology 2011: Figure II-2-1 FA 2012: 146.2 • FA 2011: 136.2 • FA 2010: 138 ME 3e: 113 INFID1_1-5 Bacteria with unusual cell walls: • Mycoplasma, Ureaplasma: • Contain sterols on the cell membrane • No cell wall • Chlamydia • Cell wall lacks muramic acid • Mycobacterium • Cell wall contains mycolic acid FA 2012: 147.2 • FA 2011: 137.2 • FA 2010: 139 ME 3e: 113 INFID1_1-6 Kaplan Immunology and Microbiology 2011: Figure II-2-4 FA 2012: 154.1 • FA 2011: 142.2 • FA 2010: 144 ME 3e: 112 INFID1_2-1 Kaplan Immunology and Microbiology 2011: Figure II-2-4 FA 2012: 154.1 • FA 2011: 142.2 • FA 2010: 144 ME 3e: 112 INFID1_2-2 Genetics • Transformation: • Uptake of free DNA from environment by competent cells • Transposition • Transposons (DNA sequences) insert themselves to new positions in single cell • Conjugation: gene transfer from donor cell to recipient cell • F+ x F• Hfr x F- • Transduction: transfer of bacterial DNA via phage vector • Generalized • Specialized: HUS, TTP, botulism, cholera, diphtheria, Streptococcus pyogenes FA 2012: 154.2 • FA 2011: 143.1 • FA 2010: 145 ME 3e: 170 INFID1_3- Endotoxin (LPS) • • • • Part of the gram-negative outer membrane Heat stable Activates macrophages Toxic portion is lipid A FA 2012: 153.2 • FA 2011: 142.1 • FA 2010: 144 ME 3e: 114 INFID1_4- FA 2012: n/a • FA 2011: 191 • FA 2010: 191 ME 3e: 121 INFID10_8-1 Other Anti-microbials Jonathan Faiwiszewski, M4, UMDNJ INFID11_1-1 INFID11_1- • Amphotericin B – – – – Used for systemic mycoses Binds to ergosterol in fungal membranes to form pores DOC for: Aspergillus, Cryptococcus, Mucor, and others Adverse effects: nephrotoxicity, arrhythmias, anemia • Nystatin – Same mechanism as amphotericin B – Only topical form because of its toxicity – Used for candida infection FA 2012: 214.1, 214.2 • FA 2011: 192 • FA 2010: 192 ME 3e: 140 INFID11_1- • Azoles – – – – Inhibit ergosterol synthesis Used for systemic infections Some in the class can cross the blood-brain barrier Adverse effects: gynecomastia, hepatotoxicity • Flucytosine – Converted in fungal cell into 5-fluorouracil – Toxicity: nausea, vomiting, bone marrow suppression • Caspofungin/Mycofungin – Inhibit beta glucan synthesis – Used for invasive aspergillosis FA 2012: 214.2, 214.5 • FA 2011: 193 • FA 2010: 192 ME 3e: 140 INFID11_1- • Terbinafine – – – – Topical antifungal Used for dermatophytes Inhibits squalene epoxidase Toxicity: GI distress, rash • Griseofulvin – – – – Oral antifungal Used for dermatophytes Disrupts microtubule formation; blocks mitosis Adverse effects: teratogenic, carcinogenic FA 2012: 215.1, 215.2 • FA 2011: 193 • FA 2010: 193 ME 3e: 140 INFID11_1- • Pyrimethamine/Sulfadiazine – Anti-folic metabolites – Used for toxoplasmosis, malaria • Quinines – Used for malaria – Block heme polymerase • Bendazoles – Inhibit glucose uptake • Pyrantel pamoate – Nicotinic receptor agonist • Ivermectin – Stimulates GABA transmission • Praziquantel – Increases calcium influx FA 2012: 215.3, 215.5 • FA 2011: 194 • FA 2010: 193 ME 3e: 122-131 INFID11_2- FA 2012: 216 • FA 2011: 195.1 • FA 2010: 193 ME 3e: 135 INFID11_3- FA 2012: 216 • FA 2011: 195 • FA 2010: 194 ME 3e: 135 INFID11_3- FA 2012: 217 • FA 2011: 196 • FA 2010: 194 ME 3e: 135 INFID11_3- Antiretroviral Agents • • • • • Protease inhibitors (PI) Nucleoside reverse trascriptase inhibitors (NRTIs) Non-nucleoside reverse transcriptase inhibitors (NNRTIs) Fusion inhibitors HAART (highly active antiretroviral therapy) – Two NRTIs + one PI – Two NRTIs + one NNRTI • HAART is initiated when: – CD4 count less than 350 – AIDS-defining illness FA 2012: 218.1 • FA 2011: 197.1 • FA 2010: 195 ME 3e: 105 INFID11_3- Protease Inhibitors • Drugs: – Atazanavir, indinavir, ritonavir, saquinavir • Mechanism: – Inhibit viral aspartate protease • Adverse effects: – – – – Hyperglycemia Inhibit CYP3A4 Thrombocytopenia Lipodystrophy FA 2012: 218.1 • FA 2011: 197.1 • FA 2010: 195 ME 3e: 105 INFID11_3- Reverse Transcriptase Inhibitors • NRTIs: – Zidovudine, didanosine, stavudine, lamivudine • NNRTIs: – Nevirapine, efavirenz • Adverse effects: – Bone marrow suppression – Peripheral neuropathy FA 2012: 218.1 • FA 2011: 197.1 • FA 2010: 195 ME 3e: 105 INFID11_3- Fusion Inhibitors • Drug: – Enfuvirtide • Mechanism: – Binds viral gp41 and inhibits fusion of HIV to CD4 cells • Adverse effects: – Hypersensitivity reactions – Local injection reactions FA 2012: 218.1 • FA 2011: 197.1 • FA 2010: 195 ME 3e: 105 INFID11_3- Interferons • Interferons are proteins made by virus-infected cells • Interferon-α: – Used in hepatitis B and C, Kaposi’s sarcoma • Interferon-β: – Used in multiple sclerosis • Interferon-γ: – Used in chronic granulomatous disease (CGD) FA 2012: 218.2 • FA 2011: 198.1 • FA 2010: 196 ME 3e: 109 INFID11_4- Antimicrobial Adverse Effect Sulfonamides Kernicterus Aminoglycosides Ototoxicity Fluoroquinolones Cartilage damage Erythromycin Cholestatic hepatitis in mom Metronidazole Teratogenic Tetracyclines Discolored teeth, inhibit bone growth Ribavirin Teratogenic Griseofulvin Teratogenic Chloramphenicol Gray baby syndrome FA 2012: 219.1 • FA 2011: 198.2 • FA 2010: 196 ME 3e: 118-121 INFID11_5- ... 2011: 142 .1 • FA 2010: 144 ME 3e: 1 14 INFID1 _4- Exotoxin • Heat labile except Staphylococcus aureus • immunogenic FA 2012: 152.1-153.1 • FA 2011: 141 .1 • FA 2010: 143 ME 3e: 1 14 INFID1 _4- Med... 152.1-153.1 • FA 2011: 141 .1 • FA 2010: 143 ME 3e: 115 INFID1 _4- FA 2012: 152.1-153.1 • FA 2011: 141 .1 • FA 2010: 143 ME 3e: 115 INFID1 _4- Infectious Diseases Jonathan Faiwiszewski, M4, UMDNJ INFID2_1-1... mycolic acid FA 2012: 147 .2 • FA 2011: 137.2 • FA 2010: 139 ME 3e: 113 INFID1_1-6 Kaplan Immunology and Microbiology 2011: Figure II-2 -4 FA 2012: 1 54. 1 • FA 2011: 142 .2 • FA 2010: 144 ME 3e: 112 INFID1_2-1

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