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STRUCTURE, BEHAVIOR AND MECHANISMS UNDERLYING SENSATION OF CH503, a DROSOPHILA MELANOGASTER PHEROMONE

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DOCTORAL DISSERTATION STRUCTURE, BEHAVIOR AND MECHANISMS UNDERLYING SENSATION OF CH503, A DROSOPHILA MELANOGASTER COURTSHIP PHEROMONE SHRUTI SHANKAR MSc Biochemical Technology A THESIS SUBMITTED FOR THE DEGREE OF DOCTOR OF PHILOSOPHY TEMASEK LIFE SCIENCES LABORATORY DEPARTMENT OF BIOLOGICAL SCIENCES NATIONAL UNIVERSITY OF SINGAPORE 2015 “DECLARATION I hereby declare that this thesis is my original work and I have written it in its entirety I have duly acknowledged all the sources of information which have been used in this thesis This thesis has also not been submitted for any degree to any university previously” ii ACKNOWLEDGEMENT I would like to thank my ‘guru’, Joanne, for accepting me as one of her first PhD students, giving me the opportunity to study in Singapore, and above all, for the discovery of CH503 and an enjoyable PhD experience Joanne has set a wonderful example for me, by being both a terrific scientific mentor and an extremely compassionate and warm person I am very grateful to Joanne, for encouraging me to think independently, giving me a lot of freedom to design experiments, and motivating me to put in my best effort at work I will always be thankful for all the time she has patiently invested in helping me edit numerous presentations, conference posters and papers I will never forget our long conversations over email, about science, my annoyances, good books and how to deal with life It made me happy to walk into lab each day, to work with Joanne and my lab mates I would like to thank Temasek Life Sciences Laboratory for providing me with excellent facilities and supporting my PhD studies A million thanks to my lab mates Kah Junn and Jia Yi for their valuable contributions-for generating the Gr68a mutant and other fly strains, meticulously carrying out immunostaining experiments and helping me with several screens I would also like to thank Ruifen for her help in generating the Gr68a mutant I am extremely grateful to Meredith for her help with establishing calcium imaging assays, for motivating me to keep trying harder and to think of alternate methods, during the times I was near to giving up, and helping me develop a keen interest in microscopy I would like to thank Wan Chin for her help with gustatory receptor screen and all my attachment students for their contributions and sharing my enthusiasm about this project I am also thankful to my lab mates Jacqueline, Yin Ning, Soon Hwee, and Emilie for being wonderful people to work with, and for their eternal willingness to help I have been extremely lucky to have Prof Kenji Mori as a collaborator I would like to thank Prof.Mori for introducing me to the fascinating concept of pheromone chirality, and giving me the opportunity to co-author many chemistry papers I thank my thesis committee members Dr.Adam-Claridge Chang, Dr.Tong-Wey Koh and Prof Daiqin, for their invaluable suggestions on my work I am deeply grateful to my parents and brother for supporting my decision to pursue a PhD, and for visiting me on several occasions to make sure I was doing well and for patiently listening to me talk about CH503 I am also grateful to have found friends like Ranjit and Ekta, who have given me great company and support over the years Lastly, I would like to thank my art teacher, ‘Lao Shi’, for making my weekends enjoyable iii TABLE OF CONTENTS TOPIC PAGENUMBER ACKNOWLEDGEMENT iii TABLE OF CONTENT iv LIST OF FIGURES vi ABBREVIATIONS ix SUMMARY xvii CHAPTER 1: INTRODUCTION 1.1 PHEROMONES MEDIATE INNATE BEHAVIORS IN ANIMALS 1.2 COURTSHIP BEHAVIOR OF DROSOPHILA MELANOGASTER 1.3 PHEROMONES OF DROSOPHILA MELANOGASTER 1.4 ORGANIZATION OF THE DROSOPHILA BRAIN 12 1.5 NEUROTRANSMITTERS OF DROSOPHILA MELANOGASTER 14 1.6 THE CHEMOSENSORY ORGANS OF DROSOPHILA MELANOGASTER 16 1.7 NEUROGENETIC CONTROL OF COURTSHIP BEHAVIOR 28 1.8 OLFACTORY PHEROMONE CIRCUIT 41 1.9 THE DISCOVERY OF CH503 AND RESEARCH HYPOTHESES 45 CHAPTER 2: MATERIALS AND METHODS 2.1 FLY STOCKS 49 2.2 COURTSHIP ASSAYS 49 2.3 IMMUNOHISTOCHEMISTRY 51 2.4 SPINNING DISK CONFOCAL MICROSCOPY 52 2.5 PROBOSCIS EXTENSION REFLEX (PER) ASSAY 55 2.6 DETERMINING THE VOLATILITY OF CH503 57 2.7 GENERATION OF TRANSGENIC FLIES 58 2.8 GENERATION OF ΔGr68a AND ΔGr68a-RESCUE (Gr68aRes) FLIES 60 2.9 CHEMICAL REAGENTS 60 iv CHAPTER 3: RESULTS PART 1: STRUCTURAL CHARACTERIZATION OF CH503 3.1 ELUCIDATION OF THE STEREOSTRUCTURE OF CH503 64 3.2 RESULTS AND DISCUSSION 65 3.3 BIOACTIVITY OF THE CH503 STEREOISOMERS 67 3.4 DISCUSSION 71 PART 2: THE CH503 NEURAL CIRCUITRY 3.5.1 MALE COURTSHIP BEHAVIOR IS INHIBITED IN A 74 DOSE DEPENDENT MANNER BY CH503 3.5.2 CH503 IS A LOW VOLATILITY CONTACT CUE AND IS 75 EFFECTIVE ONLY WHEN DETECTED ON FEMALE CUTICLES 3.5.3 CH503 IS DETECTED BY GUSTATION, NOT OLFACTION 77 3.5.4 MEASURING A TASTE RESPONSE TO CH503 USING THE 79 PROBOSCIS EXTENSION REFLEX (PER) ASSAY 3.5.5 Voila1/ TM3 GUSTATORY MUTANTS SHOW A REDUCED 82 RESPONSE TO CH503 3.5.6 (R,Z,Z)-CH503 IS DETECTED BY GR68A NEURONS ON THE MALE 85 FORELEG 3.5.7 EXPRESSION PATTERN OF GR68a 90 3.5.8 MEASURING PHYSIOLOGICAL RESPONSES TO CH503 92 FROM Gr68a NEURONS 3.5.9 THE ROLE OF ppk23 NEURONS IN CH503 DETECTION 97 3.5.10 IDENTIFICATION OF HIGHER ORDER NEURONS 103 INVOLVED IN CH503 DETECTION CHAPTER 4: DISCUSSION 117 CHAPTER 5: FUTURE DIRECTIONS 130 REFERENCES 133 v LIST OF FIGURES AND TABLES CHAPTER 1: INTRODUCTION Figure 1: Chemical structures of insect pheromones Figure 2: The hallmark courtship features of male Drosophila Figure 3: Pheromones of Drosophila Figure 4: General pathway for pheromone biosynthesis in Drosophila Figure 5: Structural components of the Drosophila brain Figure 6: Mode of action of neurotransmitters Table 1: Drosophila melanogaster neurotransmitters Figure 7: Schematic showing the frontal view of the fly head with the antennae and the maxillary palps Figure 8: The organization of the olfactory circuit in adult flies Figure 9: The gustatory organs of the fly Figure 10: The Drosophila sex-determination pathway Figure 11: Sex-specific splicing of the Drosophila sex-determination genes Figure 12: Morphological differences between male and female Drosophila Figure 13: The Organization of Dsx neuronal clusters in the CNS Figure 14: The Drosophila apoptosis pathway Figure 15: Sex-specific splicing of the fruitless gene Figure 16: Neuronal pathways mediating receptivity in female Drosophila Figure 17: Olfactory pheromone circuits Figure 18: The anatomical differences in the projection patterns of Or67d PNs in males and female flies Figure 19: The cVA circuit in the male brain comprising of neuronal clusters linked by synapses Figure 20: The bidirectional cVA circuit Figure 21 A]: Schematic of the UV-LDI-o-TOF MS method B] Picture of the anogenital region of a male fly Figure 22: The chemical structure of CH503 vi CHAPTER 2: MATERIALS AND METHODS Figure 1: Fly mounted on a coverslip for imaging studies Figure 2: Calcium imaging Figure 3: Proboscis Extension Reflex Assay Figure 4: Experimental setup to determine the volatility of CH503 Figure 5: The GAL4-UAS system CHAPTER 3-PART 1: STRUCTURAL CHARACTERIZATION OF CH503 Figure 1: The structural analogs of CH503 Figure 2: The stereoisomers of CH503 Figure 3: Bioactivity of CH503 stereoisomers Figure 4: Calculation of effect sizes for courtship data Figure 5: HPLC separation of CH503 stereoisomers Table 1: Bioactivity of CH503 analogs CHAPTER 3- PART 2: THE CH503 NEURAL CIRCUITRY Figure 1: (R,Z,Z)-CH503 is a courtship inhibitory pheromone Figure 2: CH503 has low volatility Figure 3: Flies can detect CH503 without the major olfactory organs Figure 4: CH503 inhibits the sucrose induced appetitive Proboscis extension response Figure 5: Study of Voila1/TM3 gustatory mutants Figure 6: Screen of foreleg specific Gustatory receptor neurons Figure 7: Knockdown of Gr68a or deletion of Gr68a reduces sensitivity to CH503 Figure 8: Deletion of Gr68a does not induce a suppression of the appetitive PER to CH503 Figure 9: Artificial activation of Gr68a neurons with TrpA1 Figure 10: Expression pattern of Gr68a GAL4 Figure 11: The response profile of male specifc Gr68a neurons to CH503 Figure 12: Physiological response of Gr68a to (R)-3-acetoxy-11-octacosen-1-ol Figure 13: Physiological response of Gr68a neurons to (S)-3-acetoxy-11-octacosen-1-ol Figure 14: Physiological response of Gr68a > Gr68a RNAi flies to (R,Z,Z)-CH503 Figure 15: Physiological response of ΔGr68a flies to (R,Z,Z)-CH503 vii Figure 16: Response of Gr68a neurons on the female foreleg to (S,Z,Z)-CH503 Figure 17: The response profile of ppk23 neurons to CH503 Figure 18: Color-coded time course images showing responses of Gr68a ans ppk23 neurons to CH503 Figure 19: RNAi mediated knockdown of ppk23 or ppk25 does not alter sensitivity to CH503 Figure 20: Screen to identify CH503 processing circuits Figure 21: Screen to identify CH503 processing circuits Figure 22: Courtship inhibition difference for central brain circuits Figure 23: Expression patterns of NPF GAL4 and c929 GAL4 neuronal circuits in the adult male fly brains Figure 24: Components of the NPF signalling pathway are not involved in CH503 detection Figure 25: Courtship inhibition difference for NPF signalling pathway Figure 26: Role of TK circuits in CH503 detection Figure 27: Co-localization of NPF and TK neuronal circuits Figure 28: Synaptic connectivity of Gr68a and TK circuits Figure 29: A model for gustatory pheromone perception Table 1: Gr68a cell counts in male and female forelegs Table 2: Sample sizes for calcium imaging experiments Table 3: Screen of GAL4 lines associated with higher order brain circuits for CH503 detection defects CHAPTER 4: DISCUSSION Figure 1: Line graph showing the tonic response pattern of a Gr68a neuron Figure 2: Line graph showing the phasic response pattern of a ppk23 neuron viii LIST OF ABBREVIATIONS 5HT serotonin 7,11-HD 7,11-Heptacosadiene 7,11-ND 7,11-Nonacosadiene 7-T 7-Tricosene AbdB Abdominal B AL Antennal Lobe AMMC Antennal Mechanosensory and Motor Centre CH503 3-acetoxy-11,19-octacosadien-1-ol cVA cis-vaccenyl acetate cVOH cis-vaccenol CX Central Complex Cyo curly Oster DA dopamine DCO Dorsal Cibarial Sense Organ DEG/ENaC Degenerin and epithelial Na+ channel Desat desaturase DLP Dorso-Lateral Protocerebrum dORKΔC Drosophila Open Rectifier Potassium Channel Dsx Doublesex DsxF Female specific Doublesex protein DsxM Male specific Doublesex protein DTi Diphtheria toxin EB Ellipsoid body Elav embryonic lethal abnormal visual system EPSP Excitatory Post Synaptic Potential ESI-MS Electrospray ionization- Mass Spectrometry FB Fan shaped body ix Fru Fruitless FruM Male specific Fruitless protein GABA Gamma-aminobutyric acid GAL 80 Galactose 80 GAL4 Galactose GCaMP green fluorescent protein (GFP), calmodulin, and M13 GC-MS Gas Chromatography-Mass Spectrometry GFP Green Fluorescent Protein GPCR G-Protein Coupled Receptor GR Gustatory Receptor GRASP GFP reconstitution across synaptic partners GRN Gustatory Receptor Neuron Hid Head involution defective Hox Homeobox HPLC High-performance liquid chromatography HPTLC High-performance thin layer liquid chromatography IR Ionotropic Receptor Kr-GFP Kruppel-Green Fluorescent Protein LH Lateral Horn LP Lateral Protocerebrum LSO Labral Sense Organ m/z mass to charge ratio MB Mushroom Body ME Medulla mRNA messenger Ribo Nucleic Acid NPF long Neuropeptide F NPFR1 Neuropeptide F Receptor Oe- oenocyteless Orco Odorant receptor co-receptor ORN Olfactory Receptor Neuron x CHAPTER 5: FUTURE DIRECTIONS This study on CH503, provides a framework to understand the neuronal and evolutionary basis of gustatory pheromone perception in Drosophila melanogaster In this thesis work, I investigated two main hypotheses First, I tested the hypothesis that (R,Z,Z)-CH503 was the most potent stereoisomer of the pheromone However, contrary to what was hypothesized, I found that this naturally occurring stereoisomer had strong courtship inhibitory effects at a dose of 166ng/fly and above, in comparison with the ‘S’ stereoisomer that is a potent courtship inhibitor at low doses These studies were further carried out on other Drosophila species and has led to the finding that CH503 evolved by a mechanism known as sensory exploitation (Ng et al., 2014) Second, I tested the hypothesis, that CH503, analogous to the volatile pheromone cis-vaccenyl acetate, would be detected as an olfactory modality via a single receptor However, as described in this thesis, the detection of CH503 involves the gustatory receptor Gr68a in the peripheral nervous system and the NPF and TK circuits in the central brain Neurons expressing the ion channel ppk23 were additionally, shown to physiologically respond to CH503 (Shankar et al., 2015) These findings raise further questions about the CH503 detection mechanisms both in Drosophila melanogaster and distantly related species Some of the unanswered questions include:  Does Gr68a mediate CH503 detection in other Drosophila species? Functional cloning and expression of the Gr68a gene from other species, in Drosophila melanogaster Gr68a mutants would help to address this question It might be interesting to determine if the observed differences in sensitivities to CH503 (Ng et al., 2014), are due to structural changes in the Gr68a receptor  Does the Gr68a receptor respond physiologically to all the synthetic stereoisomers of CH503? This work shows that Gr68a mediates the detection of (S,Z,Z)-CH503 and (R,Z,Z)-CH503 The role of Gr68a in detection of the remaining stereoisomers of 130 CH503 was not investigated The strongest anti-aphrodisiac properties were exhibited by the (S,E,E)-CH503 stereoisomer In order to test the role of Gr68a as the sole mediator of CH503 detection more rigorously, it will be important to determine if this receptor can detect and physiologically respond to the (S,E,E)-CH503 stereoisomer at low dosages  Ppk23 neurons respond physiologically to CH503, these neurons also contribute to courtship inhibitory behavioral response induced by the pheromone? Despite the large physiological response observed from many ppk23 neurons to CH503, knocking down the levels of ppk23 using RNAi, did not significantly alter the sensitivity of male flies to CH503 Furthermore, ppk23 deletion mutants displayed very low baseline levels of courtship To further understand the contribution of ppk23 neurons, it would be imperative to also test if transiently silencing the ppk23 circuit using a temperature – sensitive shibire transgene would alter sensitivity to CH503 It would also be interesting to find out, if over expression of ppk23 in a Gr68a mutants would restore the response to CH503  Given the possibility that Drosophila gustatory pheromones have more than one detection pathway (e.g 7-Tricosene), other classes of ppk neurons, GR’s or IR’s contribute to CH503 detection? Apart from ppk23, neurons expressing ppk25 (Liu et al., 2012b) and ppk29 (Thistle et al., 2012) and the ionotropic receptor IR20a (Koh et al., 2014) are also known to play a role in courtship behavior Furthermore, it was found that the CH503 induced courtship inhibition difference for Gr66a> Rpr, Gr22e>Rpr and Gr28b>Rpr was small To test if these chemosensory neurons are also involved in CH503 detection, it would be necessary to study ppk25, ppk29, Gr22e, Gr66a, Gr28b and IR20a gene deletion mutants 131  Do TK neurons connect with P1 command neurons in the central brain? 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IN ANIMALS 1.2 COURTSHIP BEHAVIOR OF DROSOPHILA MELANOGASTER 1.3 PHEROMONES OF DROSOPHILA MELANOGASTER 1.4 ORGANIZATION OF THE DROSOPHILA BRAIN 12 1.5 NEUROTRANSMITTERS OF DROSOPHILA MELANOGASTER. .. COURTSHIP BEHAVIOR OF DROSOPHILA MELANOGASTER Male courtship behavior of Drosophila melanogaster has been extensively characterized and comprises of innate and learned aspects Courtship steps are executed... courtship behavior has been used as a paradigm to study how pheromones influence innate behaviors and to understand the neuronal basis of pheromone perception The anatomical, cellular and molecular basis

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