MINIREVIEW
D-Amino acidsinthebrain:thebiochemistryof brain
serine racemase
Florian Baumgart and Ignacio Rodrı
´
guez-Crespo
Departamento de Bioquı
´
mica y Biologı
´
a Molecular, Facultad de Ciencias Quı
´
micas, Universidad Complutense de Madrid, Spain
The initial purification ofbrain mammalian serine
racemase was performed by Wolosker, Snyder and
coworkers using 60 brains obtained from rats [1]. This
seminal work permitted the isolation of a homo-
geneous protein preparation that displayed the ability
to isomerize l-serine into its enantiomeric d-serine
counterpart. In addition, the authors established the
molecular mass ofthe enzyme, its pH and temperature
dependence, the presence of bound pyridoxal-5¢ phos-
phate (PLP) and the exquisite activity regulation
exerted by reagents that react with free SH groups,
such as oxidized glutathione. The subsequent mole-
cular cloning of mouse brainserine racemase, as well
as the comparison with PLP-containing racemases
from other organisms, led to the identification of K56
as the lysine residue that formed the Schiff base with
the PLP moiety [2]. The first recombinant expression
and purification experiment was performed by Wolos-
ker and coworkers using HEK293 cells transfected with
a serine racemase–glutathione S-transferase plasmid [3].
Keywords
AMPA receptor; astrocytes; ATP; calcium
activation;
D-serine; gliotransmitters; GRIP;
NMDA receptor; PDZ interaction; serine
racemase
Correspondence
I. Rodrı
´
guez-Crespo, Departamento de
Bioquı
´
mica y Biologı
´
a Molecular, Facultad de
Ciencias Quı
´
micas, Universidad
Complutense, Ciudad Universitaria, 28040
Madrid, Spain
Fax: +34 91 394 4159
Tel: +34 91394 4137
E-mail: nacho@bbm1.ucm.es
(Received 30 January 2008, revised 3 April
2008, accepted 4 April 2008)
doi:10.1111/j.1742-4658.2008.06517.x
It has been recently established that in various brain regions d-serine, the
product ofserine racemase, occupies the so-called ‘glycine site’ within
N-methyl d-aspartate receptors. Mammalian brainserineracemase is a
pyridoxal-5¢ phosphate-containing enzyme that catalyzes the racemization
of l-serine to d-serine. It has also been shown to catalyze the a,b-elimina-
tion of water from l-serine or d-serine to form pyruvate and ammonia.
Serine racemase is included within the group of type II-fold pyridoxal-5¢
phosphate enzymes, together with many other racemases and dehydratases.
Serine racemase was first purified from rat brain homogenates and later
recombinantly expressed in mammalian and insect cells as well as in
Escherichia coli. It has been shown that serineracemase is activated by
divalent cations like calcium, magnesium and manganese, as well as by
nucleotides like ATP, ADP or GTP. In turn, serineracemase is also
strongly inhibited by reagents that react with free sulfhydryl groups such
as glutathione. Several yeast two-hybrid screens for interaction partners
identified the proteins glutamate receptor interacting protein, protein inter-
acting with C kinase 1 and Golga3 to bind to serine racemase, having
different effects on its catalytic activity or stability. In addition, it has also
been proposed that serineracemase is regulated by phosphorylation. Thus,
d-serine production inthebrain is tightly regulated by various factors
pointing at its physiologic importance. In this minireview, we will focus on
the regulation ofbrainserineracemase and d-serine synthesis by the
factors mentioned above.
Abbreviations
[Ca
2+
]
cyt
, cytosolic calcium concentration; AMPA, a-amino-3-hydroxy-5-methylisoxazole-4-propionic acid; AMPAR, AMPA receptor; GluR2,
glutamate receptor subunit 2; Golga3, Golgin subfamily A member 3; GRIP, glutamate receptor interacting protein; GSNO, S-nitroso-
glutathione; NO, nitric oxide; PDZ, PSD95 ⁄ disc large ⁄ ZO-1; PICK1, protein interacting with C kinase 1; PKC, protein kinase C;
PLP, pyridoxal-5¢ phosphate.
3538 FEBS Journal 275 (2008) 3538–3545 ª 2008 The Authors Journal compilation ª 2008 FEBS
The purified enzyme was extremely efficient in terms of
the elimination reaction, using l-serine-O-sulfate as a
substrate and producing pyruvate plus ammonia.
However, this purified enzyme failed to catalyze the
elimination when l-serine was used as a substrate. A
major breakthrough was the observation that both
divalent cations and nucleotides were actually cofac-
tors ofserineracemase [4]. Both theracemase and
eliminase reactions of recombinant serine racemase
expressed in mammalian cells when l-serine was used
as a substrate were activated to similar levels in the
presence of divalent cations such as calcium and mag-
nesium [4]. This activation by divalent cations was also
observed when serineracemase was recombinantly
expressed and purified from Escherichia coli [5] or
when it was purified from mouse brain [6]. When
recombinant serineracemase produced in mammalian
cells was used, in terms of d-serine synthesis (racemase
activity) both magnesium and ATP independently acti-
vated the enzyme and their effect was additive. Even
in the presence ofthe chelating agent EDTA, ATP
was still able to increase serineracemase activity [4]. In
the absence of added ATP, mammalian cells expressing
serine racemase became activated, in terms of pyruvate
production, at about 100 lm magnesium. However, in
the presence ofthe nucleotide, the amount of magne-
sium needed for half activation was close to 10 lm [4].
Similar data were obtained when the enzyme purified
from bacteria was used: inthe absence of added ATP,
calcium activated theracemase activity ofthe enzyme
at a half-maximal concentration (EC
50
) of about
26 lm, although using changes in tryptophan fluores-
cence a binding constant for calcium to serine race-
mase was narrowed down to about 6 lm [5]. The
physiological activation ofbrainserineracemase by
divalent cations is described in detail below.
Very recently, no fewer than six PLP-containing
enzymes having broad sequence homology with human
brain serineracemase have been cloned and recombi-
nantly expressed. Three recombinant plant serine race-
mases have recently been characterized: those of
Arabidopsis thaliana, Hordeum vulgare (barley) and
Oryza sativa (rice) [7,8]. An aspartate racemase that has
a very high homology with brainserineracemase has
recently been cloned and characterized from a bivalve
mollusk [9]. The so-called serineracemase from Saccha-
romyces cerevisiae has been recombinantly expressed in
E. coli and characterized, and its properties seem to
indicate that it is a paralog rather than an ortholog of
mammalian serine racemases [10]. Likewise, the serine
racemase from the hyperthermophylum Pyrobacu-
lum islandicum was both purified and recombinantly
expressed, and the isolated enzymes were characterized
[11]. Finally, the coordinates ofthe 3D structure of ser-
ine racemase from Schizosaccharomyces pombe, another
enzyme that displays high homology with mammalian
serine racemase, have been recently deposited (Protein
Data Bank code 1WTC). Sequence comparison allowed
us to rationalize the dependence of each of these
enzymes on divalent cations and nucleotides, and on
their binding to other interacting proteins.
Regulation ofserineracemase by
divalent cations and nucleotides
The sequence comparison of human brainserine race-
mase with selected homologous proteins is depicted in
Fig. 1. We recently used the coordinates obtained from
the crystal structure ofthe Mg
2+
-bound S. pombe
serine racemase and the Ca
2+
-bound Thermus thermo-
philus threonine deaminase to identify the equivalent
positions within mammalian serineracemase that
would bind the divalent cation [12]. We were able to
predict that the metal is hexavalently coordinated and
that the cation-binding site is formed by two carboxyl-
ate-containing residues, a main-chain carbonyl oxygen
and three well-ordered water molecules. The positions
involved inthe interaction with the divalent cation are
marked in orange in Fig. 1. In human serine racemase,
the residues predicted to be directly involved in cal-
cium binding are Glu210, Asp216 and Ala214. Consis-
tent with this prediction, these three residues, which
are conserved in plant and yeast serine racemases,
would be responsible for the Ca
2+
⁄ Mg
2+
racemase
activation observed for these enzymes [7,8,10]. Con-
versely, the absence of these residues inthe bivalve
and Pyrobaculum serine racemases is in agreement with
the absence of increased racemization of these enzymes
induced by Ca
2+
or Mg
2+
[9,11].
The enzyme activation by nucleotides is somehow
more puzzling. For instance, the activation of the
homologous protein E. coli Thr dehydratase by AMP
was observed as early as 1949 [13]. However, in this
bacterial enzyme the nucleotide exerted an allosteric
role, promoting protein oligomerization and activating
the enzyme [14]. Inthe absence of AMP, the K
m
of
E. coli Thr deaminase for Thr was 70 mm and it
decreased to 5 mm inthe presence ofthe nucleotide
[15]. The residues participating inthe binding of nucle-
otides (shown in red in Fig. 1) could also be predicted
because the crystal structure ofthe S. pombe serine
racemase has the nucleotide AMPpcp bound [12].
Interestingly, most ofthe nucleotide-binding sites are
conserved in all the enzymes. However, although mam-
malian serineracemase is strongly activated by nucleo-
tides [4,6,12] this is not the case in their plant
F. Baumgart and I. Rodrı
´
guez-Crespo Biochemistryofbrainserine racemase
FEBS Journal 275 (2008) 3538–3545 ª 2008 The Authors Journal compilation ª 2008 FEBS 3539
Fig. 1. Sequence alignment of human serineracemase (gi:11345492), Arabidopsis thaliana serineracemase (gi:84458483), Hordeum vulgare
(barley) serineracemase (gi:148356707), Bivalve (Scapharca broughtonii) aspartate racemase (gi:86439930), Saccharomyces cerevisiae
homolog ofserineracemase (gi:151941446), Schizosaccharomyces pombe serineracemase (gi:71041740) and Pyrobaculum islandicum ser-
ine racemase (gi:83582728). Based on the crystal structure of S. pombe serine racemase, green arrows depict b-strands and yellow barrels
depict a-helices. The modelling has previously been described in detail by Baumgart et al. [12]. The residues involved in calcium binding are
shown in orange and those involved in nucleotide binding are shown in red. Residues involved inthe binding to the PLP moiety are shown
in blue, whereas those involved in protein–protein interaction are shown in green. The first four amino acidsofthe barley serine racemase
and the final 88 amino acidsofthe Pyrobaculum serineracemase are omitted for clarity. Alignment was performed using the
CLUSTAL
software.
Biochemistry ofbrainserineracemase F. Baumgart and I. Rodrı
´
guez-Crespo
3540 FEBS Journal 275 (2008) 3538–3545 ª 2008 The Authors Journal compilation ª 2008 FEBS
orthologs [7,8]. In fact, both the bivalve and Pyrobacu-
lum serine racemases are actually inhibited by ATP,
although the former is activated slightly inthe pres-
ence of AMP [9,11].
The question hence remains regarding the exact role
of the nucleotide inbrain mammalian serine racemase
catalysis because a PLP-dependent racemization does
not require ATP-driven energy. An allosteric role may
provide an explanation. In fact, homology modeling
indicates that the nucleotide is positioned inthe mono-
mer ⁄ monomer interface [12 and Fig. 2]. In contrast to
the case of E. coli Thr dehydratase mentioned above,
we were unable to observe changes inthe oligomeriza-
tion state of recombinant mouse serineracemasein the
presence and absence of added ATP [12]. In fact, all
the recombinant versions ofserineracemase mentioned
above are either homodimers [7–9] or homotrimers [11]
in the absence ofthe nucleotide. Consequently, it is
unlikely that ATP might be regulating the quaternary
structure ofserine racemase. In this regard, as noted by
Wolosker and coworkers [4] ATP is not hydrolyzed
during catalysis, because both ADP and a nonhydro-
lyzable analog of ATP are able to activate the enzyme
to a similar extent. Furthermore, inthe cytosol the
ATP concentrations are inthe 3–6 mm range, an obser-
vation suggesting that serineracemase is always satu-
rated with enough nucleotide to exert its racemase
activity because 100 lm ATP is more than enough to
result in full activity [4,6].
Perhaps it is even more important to know if serine
racemase is activated by Ca
2+
or Mg
2+
in vivo.In
principle, if the Mg
2+
concentration inthe cellular
cytosol is indeed 600 lm [4,16], thebrainserine race-
mase would always be ‘on’. However, when type II
astrocytes were loaded with radioactive d-serine, its
release would be induced by l-glutamate and kainate,
agents known to increase intracellular calcium concen-
trations [17]. Subsequently, we observed the increased
release of d -serine by primary astrocytes when gluta-
mate, kainate or the calcium ionophore A23187 was
added to the cellular medium [5]. Likewise, C6 glioma
cells increased their secretion of d-serine when
incubated with a-amino-3-hydroxy-5-methylisoxazole-
4-propionic acid (AMPA) [18]. A more direct demon-
stration has been recently performed by Mothet and
coworkers when they showed that d-serine release is
directly related to the increase of cytosolic calcium
concentration ([Ca
2+
]
cyt
) [19]. These authors showed
that the removal of extracellular calcium, or the deple-
tion of thapsigargin-sensitive intracellular calcium
stores, abrogated the release of d-serine [19]. It is
conceivable that perhaps the increase of [Ca
2+
]
cyt
is
only involved inthe secretion of d-serine previously
accumulated in secretion granules [19] although the
storage of d-serine in granules in glia has recently been
ruled out [18]. It is very likely that serineracemase at
various intracellular localizations might be challenged
with different calcium concentrations, hence regulating
its enzymatic activity. For instance, direct coupling of
serine racemase to the AMPA receptor (AMPAR) via
glutamate receptor interacting protein (GRIP) binding
might be one way to regulate its d-serine synthesizing
activity (see below).
Nitrosylation of serineine racemase
Only scant data are available on possible post-transla-
tional modifications ofserineracemasein vivo. The
observation that both oxidized glutathione [1,5] and cys-
tamine [5] could inhibit serineracemase provided some
evidence that reactive cysteine residues should be pres-
ent that are essential for serineracemase function. When
we tested if the nitric oxide (
•
NO) donor DETA
NONOate [(z)-1-[2-(2-aminoethyl)-N-(2-ammonioethyl)
amino]diazen-1-ium,2-diolate] could alter serine race-
mase activity, we obtained a negative result [5]. Quite
recently, reports of
•
NO as an inhibitor ofserine race-
mase in a glioblastoma cell line added a new aspect to
d-serine-dependent modulation ofthe glutamatergic
synapse. The authors propose that NMDAR-mediated
calcium entry into postsynaptic neurons entails cal-
cium ⁄ calmodulin-dependent activation of neuronal
nitric oxide synthase and the consequent liberation of
•
NO. Serineracemase is subsequently nitrosylated and
inhibited, whereas d-amino oxidase, which is thought to
ACP
PLP
ACP
PLP
Ca
2+
Ca
2+
Fig. 2. Molecular model of human serine racemase, as described
by Baumgart et al. [12]. The calcium ions are depicted as yellow
spheres, the PLP moiety is shown in blue and the nucleotide analo-
gue phosphomethylphosphonic acid adenylate ester (AMP-PCP) is
shown in magenta. The molecular modelling was performed using
the crystal structures ofthe S. pombe serineracemase and the
E. coli Thr deaminase.
F. Baumgart and I. Rodrı
´
guez-Crespo Biochemistryofbrainserine racemase
FEBS Journal 275 (2008) 3538–3545 ª 2008 The Authors Journal compilation ª 2008 FEBS 3541
counteract serineracemase activity in vivo by degrada-
tion of d-serine, is upregulated by
•
NO [20,21]. Subse-
quent biochemical proof for this model was provided
[22], pinning down the residue that becomes modified
and proposing a structural model for the action of
•
NO.
Apparently, cysteine 113 (out of seven cysteine residues
in the mouse and human serineracemase sequence) can
become nitrosylated, both inthe recombinant enzyme
and in transfected cells, using the
•
NO donor, S-nitroso-
glutathione (GSNO). A molecular model of mouse ser-
ine racemase, based on a yeast homolog, reveals that
residue 113 lies in proximity to the putative ATP-bind-
ing region ofthe enzyme. Nitrosylation would therefore
lead to impaired nucleotide binding and inactivation of
the enzyme. It is noteworthy that GSNO is known to
modify cysteines not only with
•
NO but also with gluta-
thione, leading to protein glutathionylation, another
post-translational modification occurring under condi-
tions of oxidative ⁄ nitrosative stress. In fact, GSNO is
very frequently used in glutathionylating studies [23]. It
is thus conceivable that purified serine racemase
becomes modified by glutathione together with
•
NO.
Experiments with milder nitrosylating reagents that lack
a glutathione moiety would unambiguously demon-
strate if serineracemase is, in fact, modified by
•
NO.
Serine racemase-interacting proteins:
GRIP, PICK1 and Golga3
The carboxy-terminal end of both mouse and human
serine racemase display a -Val-serine-Val-COOH
sequence, a motif reminiscent ofthe type II consensus
sequence for binding to PSD95 ⁄ disc large ⁄ ZO-1
(PDZ) domains [24]. PDZ domains are among the
most ubiquitous protein–protein interaction motifs in
metazoan genomes and are especially important in the
nervous system for the assembly of synaptic complexes
and scaffolding [25,26]. After performing a yeast two-
hybrid screen ofserineracemase against a rat hippo-
campus and cortex cDNA library, the hepta-PDZ
protein GRIP was identified as a binding partner of
serine racemase [18]. Out ofthe seven consecutive
PDZ modules found in GRIP, serineracemase was
found to bind specifically to the PDZ6 domain by
means of its C-terminal PDZ-binding motif. Previ-
ously, GRIP had been described to interact with gluta-
mate receptors ofthe AMPA ⁄ kainate type [27], where
it is responsible for proper trafficking and assembly of
the receptor and accessory proteins. GRIP can bind to
the glutamate receptor subunit 2 (GluR2) subunit of
AMPA receptors via PDZ4 ⁄ PDZ5, both PDZ domains
working in concert to establish binding [27,28]. The
finding ofserineracemase interacting with the PDZ6
domain of GRIP and being activated was the first
report on cellular interaction partners ofserine race-
mase and it raised several intriguing questions. It was
not clear whether GRIP directly activated serine race-
mase or if binding led to a translocation to the prox-
imity of AMPARs in vivo (Fig. 3). Furthermore, the
influence ofthe other PDZ domains of GRIP was not
investigated. Therefore, other proteins that become
associated with GRIP, using some ofthe other six
PDZ domains, might modulate the activity of serine
racemase. Conversely, d-serine might also change the
activity of some GRIP-associated proteins. When ser-
ine racemase ⁄ GRIP interactions were first studied, it
was proposed that GRIP was released from AMPARs
when they became stimulated and phosphorylated [18],
which would lead to GRIP interacting with serine
racemase inthe cytosol where it would bind to and
activate serine racemase. With our own results we were
able to confirm the interaction of GRIP with serine
racemase via PDZ6 [12]. However, we observed that
binding to PDZ6 alone was not sufficient for activa-
tion. Rather, the presence ofthe rest ofthe C-terminal
region of GRIP, that is the PDZ7 module and a link-
ing segment between PDZ6 and PDZ7, was required
for full activation ofserine racemase, both in vitro and
in vivo. Although these results do not necessarily pre-
clude a translocation process to AMPARs mediated by
GRIP, they do show the direct activation of serine
racemase by GRIP as a result ofthe concerted inter-
action of several PDZ modules, independent of the
subcellular localization. This PDZ crosstalk, where an
isolated PDZ domain is insufficient to carry out a
specific function, has also been observed in other
examples, for instance inthe requirement of both
PDZ4 and PDZ5 for GRIP binding to GluR2 [27,28].
Interestingly, the activating effect of GRIP on serine
racemase results mainly in a change in V
max
. More-
over, the response curve to calcium remains unchanged
upon binding to GRIP under the experimental condi-
tions applied, which indicates that GRIP binding and
regulation by calcium must be regarded as independent
regulation pathways. It has been proposed that serine
racemase activation by GRIP takes place inthe cytosol
after AMPAR phosphorylation and concomitant dis-
sociation of GRIP [18]. However, because nothing is
known about the kinetics of this process, the forma-
tion of a ternary complex among the GluR2 subunit
of the AMPA receptor, GRIP and serine racemase
cannot be discounted. It would be plausible that GRIP
brings serineracemasein close proximity to the gluta-
mate-activated channel, where serineracemase might
be close to other calcium channels. Although the
AMPAR is not a calcium channel, it is conceivable
Biochemistry ofbrainserineracemase F. Baumgart and I. Rodrı
´
guez-Crespo
3542 FEBS Journal 275 (2008) 3538–3545 ª 2008 The Authors Journal compilation ª 2008 FEBS
that in certain calcium microdomains serine racemase
could become exposed to temporarily high calcium
concentrations. To shut the system off, GluR2 could
become phosphorylated, in order to release GRIP and
serine racemase, abolishing the transient activation of
serine racemase by calcium (Fig. 3). Because GRIP
can bind to serine racemase, both inthe presence and
absence of calcium, it is possible that some other
GRIP-interacting protein that also binds to PDZ6
might disrupt theserine racemase–GRIP interaction,
hence diminishing the activity ofthe former.
In a similar yeast two-hybrid screen using a human
hippocampal cDNA library, a different PDZ domain-
containing protein was found to interact with serine
racemase, also requiring the C-terminal binding motif
[30]. Protein interacting with C kinase 1 (PICK1) con-
tains one PDZ domain that is required for interacting
with protein kinase C (PKC) [30,31] or serine racemase.
It also contains a Bin ⁄ amphiphysin ⁄ Rys domain,
important for the interaction with lipids, and a coiled-
coil domain. Furthermore, it has been shown recently
that the PDZ domain of PICK1 is also capable of inter-
acting with lipid membranes, a property crucial for the
clustering of AMPAR and synaptic plasticity [32].
There are no data available regarding the effect of the
binding of PICK1 on serineracemase activity. There-
fore, biochemical characterization ofthe role of the
interaction ofserineracemase and PICK1 is needed to
judge the importance of these observations. Surely the
interaction of PICK1 with PKC leads to the temptation
to speculate on a possible phosphorylation of serine
racemase by PKC [33]. As yet, however, there are no
data available, either on the details ofthe interaction of
PICK1 with serine racemase, or on the phosphorylation
of serine racemase.
Considering that the phosphorylation of Ser880 of
the GluR2 subunit ofthe AMPA receptor, positioned
at the carboxy-terminal end ofthe polypeptide chain,
disrupts its interaction with PDZ4 ⁄ PDZ5 of GRIP, it
is tempting to speculate that phosphorylation of
Ser336 of human serineracemase or of Thr336
of mouse serineracemase might also break their inter-
action with PDZ6 of GRIP. This putative phosphory-
latable residue is located at position -3 ofthe human
(Ser–Val–Ser–Val-COOH) and mouse (Thr–Val–Ser–
Val-COOH) sequences, respectively, and both are
inserted within amino acid sequences of type II con-
sensus PDZ domain-interacting partners [24,26]. It has
been proposed that PKCa phosphorylates serine race-
mase, probably brought into its proximity by PICK1
binding [33]. This hypothesis would rationalize a novel
mode of regulation of d-serine synthesis through the
activation of nonphosphorylated serineracemase by
the multi-PDZ domain GRIP. We have been unable to
identify PKCa as a kinase that modifies purified
recombinant serineracemase (unpublished data)
although perhaps this might be the case in vivo.In
addition, both the rat and cow serine racemases are
GluR2
AMPAR
GluR2
AMPAR
GluR2
AMPAR
GluR2
AMPAR
L-Ser
D-Ser
C
C
C
C
C
L-Ser
D-Ser
C
C
P
C
PP
P
AB
C
D
L-Ser
D-Ser
L-Ser
D-Ser
Fig. 3. Proposed modes of interaction
among serine racemase, GRIP and the
AMPAR. (A) A trimeric complex is assumed.
(B) Phosphorylation ofthe GluR2 subunit of
the AMPAR at Ser880 dissociates GRIP
binding, which remains bound to serine
racemase. (C) Serineracemase is active in
the cytoplasm and does not interact with
GRIP, whereas the latter associates with
the GluR2 subunit. (D) The simultaneous
phosphorylation ofthe GluR2 subunit of the
AMPAR together with the phosphorylation
of serineracemase releases GRIP to the
cytoplasm inthe absence of any dual inter-
action.
F. Baumgart and I. Rodrı
´
guez-Crespo Biochemistryofbrainserine racemase
FEBS Journal 275 (2008) 3538–3545 ª 2008 The Authors Journal compilation ª 2008 FEBS 3543
truncated inthe carboxy-terminal end, hence lacking
GRIP-interacting sequences. Further experiments will
demonstrate if the activation ofserineracemase by
GRIP and its binding to PICK1 is exclusively present
in certain mammals or if there is sequence splicing at
this region and both rat and cow do have longer
(as-yet unidentified) versions ofserine racemase.
Consequently, at least four different modes of inter-
action can be envisaged among AMPAR, serine race-
mase and GRIP (Fig. 3). Although phosphorylation of
the GluR2 subunit ofthe AMPAR and the disruption
of its association with GRIP have been unambiguously
demonstrated, the putative carboxy-terminal phosphor-
ylation ofserineracemase remains to be established. If
GRIP brings serineracemase towards the proximity of
the calcium channel, a theoretical modulation of the
synthesis of d-serine by calcium concentration can be
postulated, in accordance with recent data [18]. Using
a mouse brain lysate we observed a trimeric GluR2–
GRIP–serine racemase (data not shown) although we
do not know which mechanisms lead to the dissocia-
tion ofserineracemase from GRIP. Nevertheless, in
the absence ofthe association with the AMPAR,
recombinant purified GRIP alone is able to increase
the activity of recombinant purified serine racemase
[12]. We have shown that certain GRIP amino acids,
present further down inthe sequence than PDZ6, are
responsible for the majority ofthe observed activation
of serineracemase by GRIP [12].
In another study to identify binding partners of ser-
ine racemase using the yeast two-hybrid technology,
the Golgi-localized protein, Golgin subfamily A mem-
ber 3 (Golga3), was found to interact with serine race-
mase [34]. In this case, however, no PDZ interactions
with the C-terminal amino acid triplet ofserine were
crucial for binding, but instead, the interaction was
established with its N-terminal 66 residues. Binding of
Golga3 increases d-serine synthesis. Intriguingly, this is
achieved through a decrease in ubiquitin ⁄ proteasomal
degradation ofserine racemase, rather than by modula-
tion ofthe catalytic rate. Serineracemase was shown to
have an average half-life of about 4.5 h. When Golga3
and serineracemase were cotransfected, both serine
racemase stability and d-serine synthesis increased con-
siderably. Thus, it is important to note that in addition
to the modulators mentioned beforehand which directly
influence the catalysis ofserine racemase, indirect
effects such as protein stability or subcellular localiza-
tion should be taken into account when investigating
the precise regulation ofserine racemase-dependent
d-serine levels at glutamatergic synapses.
In conclusion, brainserine racemase, a member of
the type II-fold PLP-dependent racemases ⁄ dehydrata-
ses, shares several mechanistic properties with other
members ofthe same family, such as activation by
nucleotides or divalent cations, although its functional-
ity inthebrain is also modulated through interaction
with specific glial or neuronal proteins.
References
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Brady RO Jr, Ferris CD & Snyder SH (1999) Purifica-
tion ofserine racemase: biosynthesis ofthe neuromodu-
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FEBS Journal 275 (2008) 3538–3545 ª 2008 The Authors Journal compilation ª 2008 FEBS 3545
. whereas those involved in protein–protein interaction are shown in green. The first four amino acids of the barley serine racemase and the final 88 amino acids of the Pyrobaculum serine racemase are. [32]. There are no data available regarding the effect of the binding of PICK1 on serine racemase activity. There- fore, biochemical characterization of the role of the interaction of serine racemase. domain- containing protein was found to interact with serine racemase, also requiring the C-terminal binding motif [30]. Protein interacting with C kinase 1 (PICK1) con- tains one PDZ domain that