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18
Profiling
IF YOU PROGRAM
PHP PROFESSIONALLY,THERE is little doubt that at some point you
will need to improve the performance of an application. If you work on a high-traffic
site, this might be a daily or weekly endeavor for you; if your projects are mainly intranet
ones, the need may arise less frequently. At some point, though, most applications need
to be retuned in order to perform as you want them to.
When I’m giving presentations on performance tuning PHP applications, I like to
make the distinction between tuning tools and diagnostic techniques. Until now, this
book has largely focused on tuning tools: caching methodologies, system-level tunings,
database query optimization, and improved algorithm design. I like to think of these
techniques as elements of a toolbox, like a hammer, a torque wrench, or a screwdriver
are elements of a handyman’s toolbox. Just as you can’t change a tire with a hammer, you
can’t address a database issue by improving a set of regular expressions.Without a good
toolset, it’s impossible to fix problems; without the ability to apply the right tool to the
job, the tools are equally worthless.
In automobile maintenance, choosing the right tool is a combination of experience
and diagnostic insight. Even simple problems benefit from diagnostic techniques. If I
have a flat tire, I may be able to patch it, but I need to know where to apply the patch.
More complex problems require deeper diagnostics. If my acceleration is sluggish, I
could simply guess at the problem and swap out engine parts until performance is
acceptable.That method is costly in both time and materials. A much better solution is
to run an engine diagnostic test to determine the malfunctioning part.
Software applications are in general much more complex than a car’s engine, yet I
often see even experienced developers choosing to make “educated” guesses about the
location of performance deficiencies. In spring 2003 the
php.net Web sites experienced
some extreme slowdowns. Inspection of the Apache Web server logs quickly indicated
that the search pages were to blame for the slowdown. However, instead of profiling to
find the specific source of the slowdown within those pages, random guessing was used
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430
Chapter 18 Profiling
to try to solve the issue.The result was that a problem that should have had a one-hour
fix dragged on for days as “solutions” were implemented but did nothing to address the
core problem.
Thinking that you can spot the critical inefficiency in a large application by intuition
alone is almost always pure hubris. Much as I would not trust a mechanic who claims to
know what is wrong with my car without running diagnostic tests or a doctor who
claims to know the source of my illness without performing tests, I am inherently skepti-
cal of any programmer who claims to know the source of an application slowdown but
does not profile the code.
What Is Needed in a PHP Profiler
A profiler needs to satisfy certain requirements to be acceptable for use:
n
Transparency—Enabling the profiler should not require any code change. Having
to change your application to accommodate a profiler is both highly inconvenient
(and thus prone to being ignored) and intrinsically dishonest because it would by
definition alter the control flow of the script.
n
Minimal overhead—A profiler needs to impose minimal execution overhead on
your scripts. Ideally, the engine should run with no slowdown when a script is not
being profiled and almost no slowdown when profiling is enabled.A high over-
head means that the profiler cannot be run for production debugging, and it is a
large source of internal bias (for example, you need to make sure the profiler is not
measuring itself).
n
Ease of use—This probably goes without saying, but the profiler output needs to
be easy to understand. Preferably there should be multiple output formats that you
can review offline at your leisure.Tuning often involves a long cycle of introspec-
tion and code change. Being able to review old profiles and keep them for later
cross-comparison is essential.
A Smorgasbord of Profilers
As with most features of PHP, a few choices are available for script profilers:
n
Userspace profilers—An interesting yet fundamentally flawed category of profil-
er is the userspace profilers.This is a profiler written in PHP.These profilers are
interesting because it is always neat to see utilities for working with PHP written
in PHP itself. Unfortunately, userspace profilers are heavily flawed because they
require code change (every function call to be profiled needs to be modified to
hook the profiler calls), and because the profiler code is PHP, there is a heavy bias
generated from the profiler running. I can’t recommend userspace profilers for any
operations except timing specific functions on a live application where you cannot
install an extension-based profiler.
Benchmark_Profiler is an example of a
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431
Installing and Using APD
userspace profiler in PEAR, and is available at http://pear.php.net/package/
Benchmark.
n
Advanced PHP Debugger (APD)—APD was developed by Daniel Cowgill
and me. APD is a PHP extension-based profiler that overrides the execution calls
in the Zend Engine to provide high-accuracy timings. Naturally, I am a little
biased in its favor, but I think that APD provides the most robust and configurable
profiling capabilities of any of the candidates. It creates trace files that are machine
readable so they can be postprocessed in a number of different ways. It also pro-
vides user-level hooks for output formatting so that you can send profiling results
to the browser, to XML, or using any format you wanted. It also provides a step-
ping, interactive debugger, which us not covered here. APD is available from
PEAR’s PECL repository at
http://pecl.php.net/apd.
n
DBG—DBG is a Zend extension-based debugger and profiler that is available
both in a free version and as a commercial product bundled with the commercial
PHPEd code editor. DBG has good debugger support but lacks the robust profil-
ing support of APD. DBG is available at http://dd.cron.ru/dbg.
n
Xdebug—Xdebug is a Zend extension-based profiler debugger written by Derick
Rethans. Xdebug is currently the best debugger of the three extension-based solu-
tions, featuring multiple debugger interfaces and a robust feature set. Its profiling
capabilities are still behind APD’s, however, especially in the ability to reprocess an
existing trace in multiple ways. Xdebug is available from http://xdebug.org.
The rest of this chapter focuses on using APD to profile scripts. If you are attached to
another profiler (and by all means, you should always try out all the options), you should
be able to apply these lessons to any of the other profilers.The strategies covered here
are independent of any particular profiler; only the output examples differ from one pro-
filer to another.
Installing and Using APD
APD is part of PECL and can thus be installed with the PEAR installer:
# pear install apd
After ADP is installed, you should enable it by setting the following in your php.ini
file:
zend_extension=/path/to/apd.so
apd.dumpdir=/tmp/traces
APD works by dumping trace files that can be postprocessed with the bundled pprofp
trace-processing tool.These traces are dumped into apd.dumpdir, under the name
pprof.pid, where pid is the process ID of the process that dumped the trace.
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432
Chapter 18 Profiling
To cause a script to be traced, you simply need to call this when you want tracing to
start (usually at the top of the script):
apd_set_pprof_trace();
APD works by logging the following events while a script runs:
n
When a function is entered.
n
When a function is exited.
n
When a file is included or required.
Also, whenever a function return is registered,APD checkpoints a set of internal coun-
ters and notes how much they have advanced since the previous checkpoint.Three
counters are tracked:
n
Real Time (a.k.a. wall-clock time)—The actual amount of real time passed.
n
User Time—The amount of time spent executing user code on the CPU.
n
System Time—The amount of time spent in operating system kernel-level calls.
Accuracy of Internal Timers
APD’s profiling is only as accurate as the systems-level resource measurement tools it has available to it. On
FreeBSD, all three of the counters are measured with microsecond accuracy. On Linux (at least as of version
2.4), the User Time and System Time counters are only accurate to the centisecond.
After a trace file has been generated, you analyze it with the pprofp script. pprofp
implements a number of sorting and display options that allow you to look at a script’s
behavior in a number of different ways through a single trace file. Here is the list of
options to
pprofp:
pprofp <flags> <trace file>
Sort options
-a Sort by alphabetic names of subroutines.
-l Sort by number of calls to subroutines
-r Sort by real time spent in subroutines.
-R Sort by real time spent in subroutines (inclusive of child calls).
-s Sort by system time spent in subroutines.
-S Sort by system time spent in subroutines (inclusive of child calls).
-u Sort by user time spent in subroutines.
-U Sort by user time spent in subroutines (inclusive of child calls).
-v Sort by average amount of time spent in subroutines.
-z Sort by user+system time spent in subroutines. (default)
Display options
-c Display Real time elapsed alongside call tree.
-i Suppress reporting for php built-in functions
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433
A Tracing Example
-m Display file/line locations in traces.
-O <cnt>Specifies maximum number of subroutines to display. (default 15)
-t Display compressed call tree.
-T Display uncompressed call tree.
Of particular interest are the -t and -T options, which allow you to display a call tree for
the script and the entire field of sort options. As indicated, the sort options allow for
functions to be sorted either based on the time spent in that function exclusively (that is,
not including any time spent in any child function calls) or on time spent, inclusive of
function calls.
In general, sorting on real elapsed time (using -r and -R) is most useful because it is
the amount of time a visitor to the page actually experiences.This measurement includes
time spent idling in database access calls waiting for responses and time spent in any
other blocking operations.Although identifying these bottlenecks is useful, you might
also want to evaluate the performance of your raw code without counting time spent in
input/output (I/O) waiting. For this, the -z and -Z options are useful because they sort
only on time spent on the CPU.
A Tracing Example
To see exactly what APD generates, you can run it on the following simple script:
<?php
apd_set_pprof_trace();
hello(“George”);
goodbye(“George”);
function hello($name)
{
echo “Hello $name\n”;
sleep(1);
}
function goodbye($name)
{
echo “Goodbye $name\n”;
}
?>
Figure 18.1 shows the results of running this profiling with -r.The results are not sur-
prising of course: sleep(1); takes roughly 1 second to complete. (Actually slightly
longer than 1 second, this inaccuracy is typical of the sleep function in many languages;
you should use usleep() if you need finer-grain accuracy.) hello() and goodbye() are
both quite fast. All the functions were executed a single time, and the total script execu-
tion time was 1.0214 seconds.
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434
Chapter 18 Profiling
Figure 18.1 Profiling results for a simple script.
To generate a full call tree, you can run pprofp with the -Tcm options.This generates a
full call tree, with cumulative times and file/line locations for each function call. Figure
18.2 shows the output from running this script. Note that in the call tree, sleep is
indented because it is a child call of hello().
Figure 18.2 A full call tree for a simple script.
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435
Profiling a Larger Application
Profiling a Larger Application
Now that you understand the basics of using APD, let’s employ it on a larger project.
Serendipity is open-source Web log software written entirely in PHP.Although it is most
commonly used for private individuals’Web logs, Serendipity was designed with large,
multiuser environments in mind, and it supports an unlimited number of authors.
In this sense, Serendipity is an ideal starting point for a community-based Web site to
offer Web logs to its users. As far as features go, Serendipity is ready for that sort of high-
volume environment, but the code should first be audited to make sure it will be able to
scale well. A profiler is perfect for this sort of analysis.
One of the great things about profiling tools is that they give you easy insight into
any code base, even one you might be unfamiliar with. By identifying bottlenecks and
pinpointing their locations in code, APD allows you to quickly focus your attention on
trouble spots.
A good place to start is profiling the front page of the Web log.To do this, the
index.php file is changed to a dump trace. Because the Web log is live, you do not gen-
erate a slew of trace files by profiling every page hit, so you can wrap the profile call to
make sure it is called only if you manually pass PROFILE=1 on the URL line:
<?php
if($_GET[‘PROFILE’] == 1) {
apd_set_pprof_trace();
}
/* regular serendipity code starts here */
Figure 18.3 shows the profile results for the Serendipity index page, sorted by inclusive
real times (using -R). I prefer to start my profiling efforts with -R because it helps give
me a good idea which macro-level functions in an application are slow. Because the
inclusive timing includes all child calls as well,“top-level” functions tend to be promi-
nent in the listing.
The total time for this page was 0.1231 seconds, which isn’t bad if you are running
your own personal site, but it might be too slow if you are trying to implement
Serendipity for a large user base or a high-traffic site. include_once() is the top-ranked
time-consumer, which is not uncommon in larger applications where a significant por-
tion of the logic is implemented in include files. Note, though, that include_once()
not only dominates the inclusive listing, but it seems to dominate the exclusive listing as
well. Figure 18.4 verifies this: Rerunning the profile with pprofp -r shows that
include_once() takes 29.7% of the runtime, without counting any child function calls.
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436
Chapter 18 Profiling
Figure 18.3 Initial profiling results for the Serendipity index page.
Figure 18.4 An exclusive call summary for the Serendipity index page.
What you are seeing here is the cost of compiling all the Serendipity includes.
Remember the discussion of compiler caches in Chapter 9,“External Performance
Tunings,” that one of the major costs associated with executing PHP scripts is the time
spent parsing and compiling them into intermediate code. Because
include files are all
parsed and compiled at runtime, you can directly see this cost in the example shown in
Figure 18.4.You can immediately optimize away this overhead by using a compiler
cache. Figure 18.5 shows the effect of installing APC and rerunning the profiles.
include_once() is still at the top of inclusive times (which is normal because it includes
a large amount of the page logic), but its exclusive time has dropped completely out of
the top five calls.Also, script execution time has almost been cut in half.
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437
Profiling a Larger Application
Figure 18.5 A Serendipity index profile running with an APC
compiler cache.
If you look at the calls that remain, you can see that these are the three biggest offenders:
n
serendipity_plugin_api::generate_plugins
n
serendipity_db_query
n
mysql_db_query
You might expect database queries to be slow. Database accesses are commonly the bot-
tleneck in many applications. Spotting and tuning slow SQL queries is covered in
Chapter 12,“Interacting with Databases,” so this chapter does not go into detail about
that. As predicted earlier, the high real-time cost of the database queries is matched with
no user and system time costs because the time that is spent in these queries is exclusive-
ly spent on waiting for a response from the database server.
The generate_plugins() function is a different story. Serendipity allows custom user
plug-ins for side navigation bar items and comes with a few bundled examples, including
a calendar, referrer tracking, and archive search plug-ins. It seems unnecessary for this
plug-in generation to be so expensive.
To investigate further, you can generate a complete call tree with this:
> pprofp -tcm /tmp/pprof.28986
Figure 18.6 shows a segment of the call tree that is focused on the beginning of the first
call to serendipity_plugin_api::generate_plugins().The first 20 lines or so show
what seems to be normal lead-up work. A database query is run (via
serendipity_db_query()), and some string formatting is performed. About midway
down the page, in the serendipity_drawcalendar() function, the trace starts to look
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[...]... for code written in PHP. With more than 2,000 internal functions in PHP s standard library, it is not hard to imagine failing to find base64_encode() when you are looking for a built-in hex-encoding function n The code base was huge—With nearly a million lines of PHP code, the application code base was so large that a manual inspection of all the code was impossible.Worse still, with PHP lacking a hexencode()... when written in PHP When I was testing APD, I discovered to my dismay that these two functions consumed almost 30% of the execution time of every page on the site.The problem was that the user cookies were not small—they were about 1KB on average—and looping through an array of that size, appending to a string, is extremely slow in PHP Because the functions were relatively optimal from a PHP perspective,... profiling tools in PHP. The individual profilers mentioned in this chapter all have some information on their respective Web sites but there is no comprehensive discussion on the art of profiling In addition to PHP- level profilers, there are a plethora of lower-level profilers you can use to profile a system.These tools are extremely useful if you are trying to improve the performance of the PHP language... and providing accessors for getting summary information on the results To start, you need to install the Benchmark libraries Prior to PHP 4.3, the Benchmark class suite was packaged with PHP After version 4.3, you need to either download the classes from http://pear .php. net or use the PEAR installer for a one-step installation: # pear install Benchmark To benchmark the performance of the function foo()... looking at what happened with parse_url between PHP 4.2.3 and 4.3.0 parse_url is a built-in function that takes a URL and breaks it into its primitive components: service type, URI, query string, and so on Prior to PHP 4.3.0 a number of bug reports said that the parse_url function’s performance was abysmally poor For perspective, you can roll back the clocks to PHP 4.2.3 and benchmark parse_url against a... preg_match, which is smart enough to cache the compiled regular expression in case it wants to use it later In PHP 4.3.0, the parse_url function was fixed not by adding caching to the regular expression but by hand-coding a URL parser Here is the same code as before, executed under PHP 4.3.0 PHP 4.3.0 preg_parse_url parse_url System + User Time: 0.000210 System + User Time: 0.000150 The built-in function... releases of the language Nor does this happen only on major releases —the open-source development model behind PHP means that many problems are addressed when they itch someone enough to need scratching.These are just two examples of code patterns that reversed themselves: In every version of PHP until version 4.3, interpolated variables in strings were much slower than concatenating strings (Refer to... question “Is it relevant?” Benchmarking can be a useful exercise in and of itself to help familiarize you with the nuances of PHP and the Zend Engine Although it might not be useful to optimize array iteration in a seldomused script, having a general knowledge of the performance idioms of PHP can help you develop a coding style that needs less optimization down the road n n Benchmarking Basics When comparing... reset on every request and used to ensure that the session was still valid This code had been in use for three years and was authored in the days of PHP3 , when non-binary-safe data (for example, data containing nulls) was not correctly handled in the PHP cookie handling code—and before rawurlencode() was binary safe The functions looked something like this: function hexencode($data) { $ascii = unpack(“C*”,... iterations, and report the average runtime: require ‘Benchmark/Iterate .php ; $benchmark = new Benchmark_Iterate; $benchmark->run(1000, foo); $result = $benchmark->get(); print “Mean execution time for foo: $result[mean]\n”; A simple example of this is to use the suite to compare the speed of the built-in function max() with the PHP userspace implementation my_max().This is a simple example of how iterating . available at http://pear .php. net/package/
Benchmark.
n
Advanced PHP Debugger (APD)—APD was developed by Daniel Cowgill
and me. APD is a PHP extension-based. profiler written in PHP. These profilers are
interesting because it is always neat to see utilities for working with PHP written
in PHP itself. Unfortunately,