Genome wide association study for reproduction traits in maternal pig breeds

... of Genome- Wide Association Study for NBA in LW_2b 196 SI 4: Manhattan plot of Genome- Wide Association Study for NBA in LW_3 197 SI 5: Manhattan plot of Genome- Wide Association Study for ... Supplementary Information LIST OF SUPPLEMENTARY INFORMATION SI 1: Manhattan plot of Genome- Wide Association Study for NBA in LW_2 196 SI 2: Manhattan plot of...

Ngày tải lên: 26/11/2015, 10:18

... monozygous twins, full siblings, and parent-offspring In each instance, the sample with the higher call-rate was retained in the analysis Analysis of association statistics After sample and SNP quality ... Working Group, Medical Faculty, University of Indonesia, Jakarta, Indonesia 8Samara Oblast Tuberculosis Dispensary, Samara City, Samara, Russian Federation 9Clinical TB and HIV...

Ngày tải lên: 06/03/2014, 04:20

... linkers, amplification of targeted DNA, purification of amplified DNA, labeling, hybridization, and scanning The Affymetrix GeneChip® Human Mapping 500K Array was used Scanning and analysis were performed ... subsequently genotyped in patients with Behçet's disease and controls using a case-control genetic association approach and the TaqMan SNP Genotyping Assays (Applied Biosys...

Ngày tải lên: 09/08/2014, 14:20

... testing of smoking will result in public health improvements [18] and reduce the likelihood of harm; such harm could include a lowering of the motivation to quit or of the self-efficacy for quitting, ... patients [20] The coordinated effort of multidisciplinary research teams that address these complex issues will help inform the circumstances under which we can tr...

Ngày tải lên: 11/08/2014, 12:20

... problems in GWAS: tag SNP selection and SNP imputation Tag SNP selection aims at selecting a small number of SNPs (called tag SNPs) from a large number of SNPs using the non-random association (linkage ... GWAS: tag SNP selection and SNP imputation A novel algorithm called FastTagger is developed to reduce the number of tag SNPs and to improve efficiency FastTagger i...

Ngày tải lên: 09/09/2015, 10:06

... TDT FOR HUMAN QTL MAPPING AND GENOME- WIDE ASSOCIATION STUDY HAO YING (Master of Science, National University of Singapore ) A THESIS SUBMITTED FOR THE DEGREE OF DOCTOR ... 43 3.3 TDT for QTL mapping by ERS 48 3.4 The power of TDT with ERS 50 CONTENTS v TDT in Genome- wide Association Study 57 4.1 FDR-controlling ... logistic model for TDT 62 Gen...

Ngày tải lên: 11/09/2015, 16:06

... conformation, FL soundness traits and overall leg action in the pig The present findings provided a reliable and comprehensive list of candidate genes for further use in fine mapping and biological ... weak/upright rear legs, and the original scores for these four traits were adjusted by subtracting from the score and taking the absolute value for each an...

Ngày tải lên: 14/08/2014, 13:21

... the key pathways involved in lupus pathogenesis, with each pathway constructed of a number of interacting proteins making an individual contribution to disease susceptibility Page of (page number ... Arthritis Research & Therapy Vol 11 No Cunninghame Graham reproducibility between GWAS may reflect an overall lack of power for each individual study, since each published GWAS was of inter...

Ngày tải lên: 09/08/2014, 14:22

... case (P-Hat) The median of the cumulative genetic risk in the case group is 0.90, and in the control group 0.01 Quantiles of the estimated cumulative genetic risk (PHat) using different genetic models ... accuracy in the independent dataset despite a median cumulative genetic risk in the discovery dataset of 0.90 for the case group, and 0.01 for the c...

Ngày tải lên: 11/08/2014, 12:21

... Singapore Coronary Artery Genetics Study xv SCES: Singapore Chinese Eye Study SCES: Singapore Chinese Eye Study SCHS: Singapore Chinese Health Study SiMES: Singapore Malay Eye Study SINDI: Singapore ... that studies of coronary artery disease in Asia are conducted to address this increasing burden 1.3 Overview of the etiology of coronary artery disease The etio...

Ngày tải lên: 09/09/2015, 08:17

... feature selection methods confined to genome- wide association studies in Subsection Chapter1: Introduction 1.3.1 Model selection methods and some feature selection methods incorporated into model selection ... original SCAD method Chapter 3: Model selection criterion in generalized linear models 37 Chapter Model Selection Criteria in Generalized Linea...

Ngày tải lên: 11/09/2015, 16:05

... decision-tree learning research to itself 3.3 Training Attributes The training attributes that we prepared for Japanese ellipsis resolution are listed in Table The training attributes in the table ... test dialogues (1685 subject ellipses), and none were included in the training dialogues Table indicates the training size and performance calculated by F-measure This illustra...

Ngày tải lên: 23/03/2014, 19:20

... associated with individual markers had values between 0.3% and 0.7% In most cases, the alleles that increase the value of a trait at a particular locus in the mapping cross come from the parental ... of loci regulating a given trait [41] According to that model, the number of loci involved in the regulation of a quantitative trait is a function of th...

Ngày tải lên: 09/08/2014, 18:21

... from three selected strains of turkeys, referred to as strains A, B and C Strains A and B are female lines Strain C is a male line, which produces tom turkeys for matings at the final stage of ... egg production of turkeys Poult Sci 51, 86-92 Nestor KE (1977) Genetics of growth and reproduction in the turkey Selection for increased body weight alone and in combination...

Ngày tải lên: 09/08/2014, 18:22

... joint estimation of genetic parameters for reproductive and growth traits in turkeys because 1) reproductive traits are measured on a restricted fraction of the population; 2) there are missing ... from three selected strains of turkeys, referred to strains A, B and C Strains A and B are female lines Strain C is a male line, which produces tom turkeys for matings at...

Ngày tải lên: 09/08/2014, 18:22