A visualization tool for the rapid analysis of bacterial transcriptome data pot

... publicly available. We therefore developed Genome2D, a software tool that enables visualization of tran- scriptome data onto a linear map of an annotated bacterial genome and at the same time highlights ... all media for any purpose, provided this notice is preserved along with the article's original URL. Genome2D: a visualization tool for the rapid an...

Ngày tải lên: 09/08/2014, 20:20

... the kinetic parameters t hat enable such oscillations. The main result of such an analysis is that oscillations arise if t he parameter k 3 is the l argest and the parameters k 6 and k 7 are the smallest ... reaction-centered graphs of the type o f Graph 1 (these paths may contain parallel and antiparallel arrows). The sign of that element therefore depends on the both...

Ngày tải lên: 19/02/2014, 16:20

... periodicity, as discussed above for TATA tetramers. In this example, the hybrid autocorrelation-IPDFT result is biased towards the IPDFT, as a result of the IPDFT having a larger dynamic range than the autocorrelation. ... Silverman and R. Linsker, A measure of DNA periodic- ity,” Journal of Theoretical Biology, vol. 118, no. 3, pp. 295–300, 1986. [23] S. Tiwari, S. Ramac...

Ngày tải lên: 22/06/2014, 00:20

... both increase the number of genes annotated in the database and to improve the annotation features and abilities of the database. The rate limiting step for input of data into the database is the manual ... to other TF binding site databases The goals and features of the NFI-Regulome database appear unique among TF binding site databases. There are a number of...

Ngày tải lên: 10/08/2014, 09:22

... the software can be transferred by email or CD, and are available for download from the internet. The software offers easy navigation and various functions to access the content. Potential users ... Broussais – Hôtel Dieu, Paris. Partner manager – Pierrre Durieux Italy: Unit of Clinical Governance, Agenzia Sanitaria Regionale (Regional Health Care Agency) of Emilia-Romagna, Bolo...

Ngày tải lên: 11/08/2014, 05:22

Ngày tải lên: 18/02/2014, 01:20

... to facilitate the implementation and enforcement of risk management measures. These may include appropriate analytical methods; reference materials; and, the tracing of products 9 for the purpose ... incorporate that information and, if necessary, risk management measures adapted accordingly. 9 It is recognised that there are other applications of product tracing. These a...

Ngày tải lên: 13/03/2014, 21:56

... (tissue) phenotypes. The bioinformatics tools and procedures currently available in the field of metabolomics are more rele- vant for the annotation of mass peaks or for the inter- pretation of whole mass peaks ... pathways and networks. Trends Biochem Sci 33, 101–103. 33 Okuda S, Yamada T, Hamajima M, Itoh M, Katayama T, Bork P, Goto S & Kanehisa M (2008) KEGG atlas mapp...

Ngày tải lên: 16/03/2014, 01:20

... dictionary entries, the automatic specification of variables, and the auto- matic evaluation of formulas. The proposed formula finder and trial translator systems are compatible; the former enables ... than will actually be needed in the formula; the machine will use only those variables that are actually required. A. THE AUTOMATIC SPECIFICATION OF VARIABLES AND EVAL...

Ngày tải lên: 16/03/2014, 19:20

... evidence for the other. With this "accepted" authority, a representation for the argument can be built as the analysis proceeds. (The design of the oracle is another research area altogether, ... to think of the representation for an argument as a tree with claims as fathers to their evidence. The speaker thus has a particular tree structure...

Ngày tải lên: 17/03/2014, 19:21