Tài liệu Báo cáo khoa học: Crystal structure of a subtilisin-like serine proteinase from a psychrotrophic Vibrio species reveals structural aspects of cold adaptation docx
... ascomycete fungal laccase from
Thielavia arenaria – common structural features of
asco-laccases
Juha P. Kallio
1
, Chiara Gasparetti
2
, Martina Andberg
2
, Harry Boer
2
, Anu Koivula
2
, Kristiina Kruus
2
,
Juha ... observed for MaL, that may determine
the properties of these asco-laccases at high protein concentrations.
Database
Structural data are available in the Protein Data Ba...
... importin -a
nuclear import pathway, provided that CLIC4 can undergo a conforma-
tional rearrangement that exposes the NLS in an extended conformation.
Database
Structural data are available in ... atoms) and r
j
is the standard deviation of B
factors. The normalized B factors have a zero mean and unit
variance. All atoms that satisfy B
z
‡ 4 are treated as outliers
and discarded. Aft...
... Inoue T, Matsumura H,
Kobayashi A, Hagihara Y, Uegaki K, Ataka M, Kai Y
& Ishikawa K (2006) Crystal structure of thioredoxin
peroxidase from aerobic hyperthermophilic archaeon
Aeropyrum pernix ... to structure and
catalysis. Biochemistry 48, 3417–3424.
31 Nakamura T, Matsumura H, Inoue T, Kai Y, Uegaki
K, Hagihara Y, Ataka M & Ishikawa K (2005)
Crystallization and prelimina...
... phytate with pH optima in the
acidic range. They consist of two domains, a large a ⁄ b
domain and a small a domain with the catalytic site at
the interface of the two domains [4,5]. HAPs can initi-
ate ... substrate-free
AppA the C
a
atoms are 2.41 A
˚
apart, whereas for the
substrate-free PhyK and the substrate-loaded AppA
the averaged distance is only 1.87 A
˚
.
Distinct c...
... Shimomura T, Denda K, Kitamura A, Kawaguchi T,
Kito M, Kondo J, Kagaya S, Qin L, Takata H,
Miyazawa K et al. (1997) Hepatocyte growth factor
activator inhibitor, a novel Kunitz-type serine protease
inhibitor. ... Sprengeler
PA, Mortara K, Shrader WD, Sperandio D, Chan H,
McGrath ME et al. (2003) The structure of the extra-
cellular region of human hepsin reveals a serine prot...
... Ivanova N, Sorokin A, Anderson I, Galleron N,
Candelon B, Kapatral V, Bhattacharyya A, Reznik G,
Mikhailova N, Lapidus A et al. (2003) Genome
sequence of Bacillus cereus and comparative analysis
with ... 276–280.
7 Handa N, Terada T, Kamewari Y, Hamana H, Tame
JRH, Park S-Y, Kinoshita K, Ota M, Nakamura H,
Kuramitsu S et al. (2003) Crystal structure of the con-
served protein TT15...
... structure of a subtilisin-like serine proteinase from
a psychrotrophic Vibrio species reveals structural aspects
of cold adaptation
Jo
´
hanna Arno
´
rsdo
´
ttir
1
, Magnu
´
s M. Kristja
´
nsson
2
and ... glycosylase from
Atlantic cod (Gadus morhua) reveals cold- adaptation
features. Acta Crystallogr Sect D 59, 1357–1365.
10 Aghajari N, Van Petegem F,...
... Cys166 and
the nicotinamide ring of the NAD
+
cofactor during
catalysis. The average isotropic temperature factor values
for the main chain and all atoms of the 359 residues from
each monomer are, ... gene; an anti-
sense primer 5¢-CAGCCAAGCG
CCTAGGGAGCGAGA
AC-3¢, containing a BamHI site (underlined) and starting
31 nucleotides downstream of the stop codon. The total
volume of the...
... tetramer.
The structure of a dimer of ZmPDC was used as a search
model, as calculation of low resolution models of E. cloacae
PDC (EcPDC) from small angle X-ray solution scattering
data [21] had indicated ... Marion-Poll, A. , Caboche, M., Kamiya, Y. &
Koshiba, T. (1998) Molecular cloning and characterization of
aldehyde oxidases in Arabidopsis thaliana. Plant Cell Phys...
... "top-down" approach, as reallsed in the
language Prolog, has a great deal in common with
the relational approach to databases, which can be
seen as the result of a "bottom-up" effort to make ... make
database languages more like natural language.
However Prolog is much more general than
relational database formalisms, in
that it
permits
data to be defined by...