structure properties and computer identification of eukaryotic genes

... sequence and annotation information that can be queried and is in a standard format [32,33] The abundance of DAS servers for a variety of organisms provides rich and diverse sources of input ... complete re-creation of the gene structure annotation and for analysis of manual annotation procedures that could aid in future manual annotation efforts and techniques After a gene structure has been ... reverse strand 32921298 71435182 Reset mRNA structure 71435181 89248560 Portals GeneSeqer at PlantGDB 159981 160344 (GeneSeqer) 160444 160488 (GeneSeqer) 11 71441960 start 160575 160721 (GeneSeqer,GENSCAN)...

Ngày tải lên: 14/08/2014, 16:21

... crystallographic structure of the human deoxycytidine kinase (dCK) was solved [28] The amino acid sequence identity is 34% between dNK and dGK [29], and 47% between dGK and dCK [28], and the structures of ... eluted as a mixture of a dimer and a tetramer For further investigation of the role of size, conformation and polarity of amino acid 106 for the function and structure of human TK1, we created nine ... V106K, V106L, V106M, V106Q and V106T We then characterized the enzymatic properties of the mutant enzymes The apparent native sizes of the –ATP forms of V106WT and of the mutant recombinant enzymes...

Ngày tải lên: 16/03/2014, 16:20

... later The structures of A and B are shown in Fig 2, which revealed that the molecular structures of A and B are similar and also symmetric to our satisfaction Selected bond lengths ( and bond ... addition, the bond lengths of C5eC7 (1.47.1(4)) and C8eC9 (1.455(7)) are longer than that of C7e C8 (1.320(4)) and O3eC9 (1.304(4)), or the bond lengths of C14e C13 (1.457(4)) and C12eC11 (1.449(4)) ... 0.1701 1.028 Gof on F2 314 G Xu et al / Dyes and Pigments 101 (2014) 312e317 Fig Molecular structure of A and B showing 50% probability displacement 3.2 Linear absorption spectra and single-photon...

Ngày tải lên: 01/07/2014, 13:22

... 10 O O Me Structure, Properties, and Preparation Of Boronic Acid Derivatives Figure 1.3 Representations of the X-ray crystallographic structure of phenylboronic acid (A) ORTEP view of a dimeric ... OMe 41 42 1.2 Structure and Properties of Boronic Acid Derivatives polyols, by Kuivila and co-workers, described the preparation of several esters of phenylboronic acid by reaction of the latter, ... example, the pKa of PhB(OH)2 decreases 21 22 Structure, Properties, and Preparation Of Boronic Acid Derivatives from 8.8 to 6.8 and 4.5 upon formation of cyclic esters with glucose and fructose,...

Ngày tải lên: 02/07/2014, 12:53

... indications that the number of HD-Zip III genes and gene family structure may vary between species, especially between angiosperms and gymnosperms We evaluated and compared gene family structure in poplars ... Hasebe M: Isolation of homeodomainleucine zipper genes from the moss Physcomitrella patens and the evolution of homeodomain-leucine zipper genes in land plants Molecular Biology and Evolution 2001, ... different classes of plant homeobox genes [7] One of the major groups of these genes is HD-Zip, which is divided into classes I to IV Both the DNA-binding Homeodomain (HD) and the basic leucine...

Ngày tải lên: 11/08/2014, 11:21

... discovery of many stressed-induced genes involved in stress response and tolerance Macro and microarray studies of abiotic stress responses in Arabidopsis and Oryza sativa allowed the identification of ... organ-specific unigenes in sunflower The aim of this work was to detect candidate genes associated to regulatory and stressresponse pathways common to both stresses and at the Page of 18 (page number ... below 5% out of total candidate genes for reported cDNA microarrays studies [35,49,52] the number of validated genes in this work is highly representative of the transcription profile patterns...

Ngày tải lên: 12/08/2014, 05:20

Ngày tải lên: 14/11/2014, 12:40

... variety of computers including obsolete, old, middle-aged and new computers It exists because of the efforts of hundreds of volunteers and donations from people in all walks of life Volunteers and ... the course of the winter and spring; and most of those were in the habit of A Dissertation on the Medical Properties by A McAllister 18 using ardent spirit freely And though numbers of temperate ... stupid, and wisdom to men void of understanding; capable of soothing the sorrows of the afflicted, of healing the wounds of the spirit, and assuaging the anguish of a broken heart But how it fulfils...

Ngày tải lên: 17/02/2014, 22:20

... shown) Cloning of anserinase cDNA PCR was performed using a set of primers (A and B) and the first-strand cDNA for 3¢ rapid amplification of cDNA ends (RACE), prepared from total RNA of 6004 Nile ... including 56 bp of 5¢ UTR, 1482 bp of ORF, and 299 bp of 3¢ UTR The coding region of the sequence was translated into 494 amino acids, which included a typical signal peptide of 18 amino acids and two ... total volume of 50 lL containing 0.75 lL of a template, 150 pmol of a forward primer (A), 150 pmol of a reverse primer (B or C), · G-Taq buffer, 10 nmol each of dATP, dGTP, dCTP and dTTP, and 0.5...

Ngày tải lên: 19/02/2014, 07:20

... final properties of the product A method is presented to quantify the effect of thermal and pressure history on the isotropic and quiescent crystallization kinetics of four important structures of ... influence of of cooling rate on the structure and resulting mechanical performance is explored for a set of isotactic polypropylenes with varying molecular weight, insertion of co-units and addition of ... Schrauwen Deformation and Failure of Semicrystalline Polymer Systems: Influence of Micro and Molecular Structure Ph.D thesis, Eindhoven University of Technology, 2003 Quantification of Non-Isothermal,...

Ngày tải lên: 22/02/2014, 09:20

... redox state of the cysteinyl residues of apoFNR should be relevant for function and properties of the protein Therefore the redox state of the cysteinyl residues of the various forms of apoFNR – ‘aerobic’ ... fivefold alkylated apoFNR, and a minor signal of threefold alkylated FNR (Fig 1B) Therefore, aerobic and anaerobic apoFNR are mixtures of FNR with one, three and five, and five and three cysteine ... 1) The residues 4261 Disulfides of apoFNR Fig MALDI-TOF spectra of aerobically (A) and anaerobically (B) prepared and carboxymethylated apoFNR The samples of apoFNR were alkylated with 10 mM iodoacetate...

Ngày tải lên: 23/03/2014, 15:20

... concentration of XAIP (b) and with lM concentration of chitinase enzyme (c) for h, and (B) in the absence of any protein (a), with 100 lM concentration of XAIP (b) and with 100 lM concentration of chitinase ... Tyr159–Pro160 and Trp253–Asp254 which are conserved in the structures of other members of the subgroup consisting of hevamine [10], Con-B [11], narbonin [12] and XIP-I [9,13] Overall structure of XAIP ... internal space of the TIM barrel considerably Of the three observed cis peptides, two (Gly33–Phe34 and Trp253–Asp254) are found at the ends of b-strands b2 and b8, respectively These are part of the...

Ngày tải lên: 29/03/2014, 09:20

... of the structural and functional properties of the native proteins and thus may offer a useful basis for the design of agents for therapeutic intervention [7] Studies of different fragments and ... Therefore, the objectives of this study were to analyze (a) the effect of KL4 on the physical properties of membranes, in the absence and presence of Ca2+, using fluorescence anisotropy of 1,6-diphenyl-1,3,5-hexatriene ... (DSC) and fluorescence confocal microscopy of giant unilamellar vesicles (GUVs), (b) the effect of the lipid composition on KL4 structure, in the absence and presence of Ca2+, using CD and (c)...

Ngày tải lên: 30/03/2014, 11:20

... exp − Εg kT (2.19) where Nc and Nv are the density of state of conduction band and valence band, respectively, and Eg is the energy band gap of materials When electrons and holes are tightly bound ... QS and ND are surface charge and the number of ionized donor states per unit volume, and K, εO, and ∆φS denote the static dielectric constant of the oxide, the permittivity of the vacuum, and ... temperature of 420 °C 30 2.9 (a) Top view of a suspended microhotplate structure, (b) Schematic of the various layers comprising the structure and (c) Temperature programmed response of...

Ngày tải lên: 28/05/2014, 14:44

... Key Basic Research Project of 08JC1411000, and the Research fund for the Doctoral Program of Higher Education of China The authors sincerely thank Professor D.P Yu and Professor Q Zhao (the State ... Department of Physics, Shanghai Jiao Tong University, Shanghai 200240, People’s Republic of China 2Key laboratory of Artificial Structures and Quantum Control (Ministry of Education), Department of Physics, ... experimental section and supplied the help in experiment WL and ML mainly helped to carry out the measurement of CA and sliding angles WS helped to amend the manuscript and the analysis of FE properties...

Ngày tải lên: 21/06/2014, 06:20

... chromator and Cu Ka radiation (k = 1.5418 A) in the range of 15–80° at room temperature while the tube voltage and electric current were held at 40 kV and 20 mA The morphology and microstructure of ... images (a) of CdS nanowires and (b) of 1D CdS@ZnS core-shell nanocomposites the surface of the CdS nanowires ZnS nanoparticles mainly show two sets of lattice fringe spacings of 0.27 nm and 0.19 ... became rough (inset of Fig 2b) The XRD and SEM results indicate that the asgrown product is a composite material of CdS and ZnS with a 1D morphology Detailed microstructures of the product were...

Ngày tải lên: 22/06/2014, 01:20

... paper addresses the problem of optimal and reduced complexity soft-input decoding of QA codes with a termination constraint An optimal state model for soft-decoding of QA codes, exploiting a termination ... different FSMs: an encoding one and a decoding one The number of states of these FSMs will be denoted Ne and Nd , respectively The sets of states for the encoding and decoding FSM will be denoted ... analyze these properties SYNCHRONIZATION PROPERTIES OF QA CODES The synchronization recovery properties of VLC has been studied in [2], where the authors propose a method to compute the PMF of the so-called...

Ngày tải lên: 22/06/2014, 19:20

... absorbance in the presence of the sample and H2 O2 , A0 is the absorbance of the control in the absence of the sample and H2 O2 , and A is the absorbance only in the presence of the H2 O2 2.6 Nuclear ... analysis 3.2 Structure elucidation of TMP-A The intensity of bands around 3408.22 cm−1 in the IR spectrum (Fig 1) was due to the hydroxyl stretching vibration of the polysaccharide and as expected ... broad The bands in the region of 2923.62 cm−1 were due to C–H stretching vibration, and the bands in the region of 1643.29 cm−1 were due to associated water [20] Two strong absorption bands at 1075.03...

Ngày tải lên: 28/06/2014, 11:20

... The gene structure and density statistics are shown in Table The base composition of Br and At genes is very similar The average length of Br genes (ATG to stop codon) is 73% that of At genes This ... thaliana Figure of the genome structures of B rapa and A thaliana based on 24 ancestral karyotype genome building blocks Comparison Comparison of the genome structures of B rapa and A thaliana ... this study, we refined inferences of the number and timing of polyploidy events, and we now discuss the impact of these events on the structure and evolution of the Brassica 'A' genome (Figure...

Ngày tải lên: 09/08/2014, 20:20

... gene identification by paired-end RNAsequencing (a) Identification of fusion gene candidates through selection of paired-end reads, the ends of which align to two different and non-adjacent genes ... the regulation of the genes, and link different oncogenic pathways For example, promoter donating genes of interest in this regard include RARA and NOTCH1 Besides these two types of fusion, we ... with sequencing data by drawing images of sequencing coverage and copy number data along with the structure of each candidate gene Parsing of alignments and other custom analyses were done with...

Ngày tải lên: 09/08/2014, 22:23