doing a simple exploratory analysis with rdp3

... Thr Thr AAU AAC AAA AAG Asn Asn Lys Lys AGU AGC AGA AGG Ser Ser Arg Arg U C A G G GUU GUC GUA GUG Val Val Val Val GCU GCC GCA GCG Ala Ala Ala Ala GAU GAC GAA GAG Asp Asp Glu Glu GGU GGC GGA GGG ... C A G C CUU CUC CUA CUG Leu Leu Leu Leu CCU CCC CCA CCG Pro Pro Pro Pro CAU CAC CAA CAG His His Gln Gln CGU CGC CGA CGG Arg Arg Arg Arg U C A G A AUU AUC AUA AUG Ile Ile Ile Met ACU ACC ACA ACG ... Sequence databases 2.2.1 General nucleic acid sequence databases 2.2.2 General protein sequence databases 2.2.3 Specialized sequence databases, reference databases, and genome databases 2.3 Composite...

Ngày tải lên: 28/03/2014, 10:20

... regulated often by a small number of other genes [3,4] so a reasonable representation of a network is a sparse graph A sparse graph is a graph  parametrized by a sparse matrix W, a matrix with ... profiling data sets used to estimate LPSLGNs are an N = 605 × T = 15 matrix (ALPHA) and an N = 605 × T = 18 matrix (CDC15) Training data for regression analysis N A training set for regression analysis, ... networks Analysis of the statistical and topological properties of learned LP-SLGNs may have practical value; for example, genes with high random walk betweenness, a measure of the centrality of a node...

Ngày tải lên: 12/08/2014, 17:20

... give a precise standard deviation of a SPARC calculated value for any individual molecule, in general, SPARC can calculate the pKa for simple molecules such as oxy acids and aliphatic bases and acids ... University of California) Also, the SPARC calculator has been used for aiding industry (such as Pfizer, Merck, Pharmacia & Upjohn, etc.) in the areas of chemical manufacturing and pharmaceutical and pesticide ... (SPARC calculates the pKa for carbon acid within ± 1.3 pKa units) SPARC has not yet been designed to calculate, such as quaternary amines SPARC also may not be able to discriminate positional...

Ngày tải lên: 22/03/2014, 14:20

... σAm σAoAm 2 2 σe σAo σAm σC 2 2 σe σAo σAm σAoAm σC Analysis models (Co)variances estimated A AMR AC AMRC 2 σe σAo 2 σe σAo σAm σAoAm 2 σe σAo σC 2 2 σe σAo σAm σAoAm σC Simulation models: A: ... σAm 2 (2) Model adequacy and data structure 373 Table I Models used to simulate and analyse data Simulation models (Co)variances fitted A AMR0 AMRi∗ AMR0C AMRi∗ C 2 σe σAo 2 σe σAo σAm 2 σe σAo ... and maternal heritabilities were small (population 2) 375 Model adequacy and data structure Table II Values of variance components and parameters used for simulation Variances, covariances and...

Ngày tải lên: 09/08/2014, 18:21

... is essentially managed with a closed studbook, at a national level However, a few foreign Standardbred stallions may be used (since 1977) Anglo-Arab and Selle Franqais were managed with open ... Trotteur Fran!ais and Selle Fran!ais showed similar trends, with the numbers of to births a little more than doubling in 18 years Anglo-Arab and Arab increased in numbers but remained at a moderate ... the present average coefficient of inbreeding is low in Selle Fran!ais In Anglo-Arab, crosses (such as Thoroughbred x Arab, Anglo-Arab x Arab, etc) are allowed too However, Anglo-Arab was found...

Ngày tải lên: 09/08/2014, 18:22

... quantitative and the categorical variates Finally, procedures are illustrated with a data set pertaining to calving difficulty (categorical), birth weight and pelvic opening a method of approach; ... survival, may be a non-linear function of genetic and non-genetic variables (sire, breed, herd-year) and may also depend on quantitative response variates A possible course of action in the analysis ... general aspects Suppose the available data pertain to three random variables: two quantitative (e.g., calf’s birth weight and dam’s pelvic opening) and one binary (e.g., easy vs difficult calving)...

Ngày tải lên: 09/08/2014, 22:23

... Empirically, it is likely to be very rare SL, GA, JD, CD have made contributions for acquisition of data and analysis of data EA, BF have made contributions for analysis and interpretation of data ... d'usage de cannabis, alcool, tabac et autres drogues 17-18 ans en France - ESCAPAD 2003 Paris: OFDT; 2004 Statistical data Health Insurance On-line [http://www.ameli.fr/lassurance-maladie/statistiques-et-publications/donnees-statistiques/ ... psychotropic treatment (antidepressants, stimulants, antipsychotics and benzodiazepines) in children and adolescents Data is derived from several national health insurance databases Results are compared...

Ngày tải lên: 11/08/2014, 17:20

... gj Frequency AA AA 1 k0p4 + 2k1p3+ k2p2 AA Aa 0.5 0.5 k02p3q + 2k1p2q Aa AA 0.5 0.5 k02p3q + 2k1p2q AA aa 1 k02p2q2 aa AA 0 k02p2q2 Aa Aa 0.5 0.5 0.5 k04p2q2 + 2k1pq + k22pq Aa aa 0.5 0.5 k02pq3 ... In addition, the real data example shows that, in this data set, estimators based on molecular covariances are more similar and more compatible with those based on pedigree, than estimators based ... depend on the context Assuming that the allele frequencies are random draws from a Beta distribution ¯ with parameters a and b, p and Var (p) are a/ (a + b) and a/ b [ (a + b) (a + b + 1)], respectively.Thus,...

Ngày tải lên: 14/08/2014, 13:21

... the average information algorithm, approximate variances of variance components are obtained from the inverse of the information matrix Variance components as well as heritabilities at given trajectory ... to calculate the variances and covariances among defined trajectory points 2.2 Calculation of standard error of parameters derived from RR coefficients ˆ Consider a genetic variance covariance matrix, ... functions of variance components (such as heritabilities) a Taylor series expansion can be used to approximate the variance of a variance ratio as detailed by Lynch and Walsh [7] For the ratio of genetic...

Ngày tải lên: 14/08/2014, 13:22

... A as (PA!P’) where P is an orthogonal matrix and A* is a tridiagonal matrix I (A Using algebra similar to that of Smith and Graser (1986), it can be shown that quantities arising in eqns(11) and ... R a with a real, and the predictor for e -ca D R D a is imaginary, so that ia R is a real quantity, as would be anticipated REML equations to estimate QA and The component matrices = = yy Q are ... structure of A with real l quadrants (L’BL and D) and imaginary quadrants (iL’C) and (iL’C)’ can be used to give an algorithm for A* and q and to evaluate eqns(12) to (16), using only * real arithmetic...

Ngày tải lên: 14/08/2014, 20:20

... identical structure, but any technique that creates a table with an identical structure can be used Additionally, the Copy( ) method of the DataTable object can create a new DataTable having the same ... SqlDataAdapter da = new SqlDataAdapter("SELECT * FROM Orders", ConfigurationSettings.AppSettings["Sql_ConnectString"]); DataTable dt = new DataTable(ORDERS_TABLE); da.FillSchema(dt, SchemaType.Source); ... structure and data as the original as shown in the following code sample: // Create the source table DataTable dtSource = new DataTable("Source"); // Fill the source table with data // Create the...

Ngày tải lên: 28/10/2013, 18:15

... ConfigurationSettings.AppSettings["Sql_ConnectString"]); DataTable orderTable = new DataTable(ORDERS_TABLE); da.FillSchema(orderTable, SchemaType.Source); da.Fill(orderTable); dsSource.Tables.Add(orderTable); // Fill the OrderDetails table and add ... the DataSet da = new SqlDataAdapter("SELECT * FROM [Order Details]", ConfigurationSettings.AppSettings["Sql_ConnectString"]); DataTable orderDetailTable = new DataTable(ORDERDETAILS_TABLE); da.FillSchema(orderDetailTable, ... { dsSource = new DataSet("Source"); SqlDataAdapter da; // Fill the Order table and add it to the DataSet da = new SqlDataAdapter("SELECT * FROM Orders", ConfigurationSettings.AppSettings["Sql_ConnectString"]);...

Ngày tải lên: 28/10/2013, 18:15

... containing the image from the database Create a SQL statement to retrieve the required image from the database and retrieve the image using a DataReader A DataTable or DataSet filled using a DataAdapter ... but not straightforward Fortunately, it is much simpler with ASP.NET than it was in ASP Two web pages are required: one that contains the user interface that the client sees and one that retrieves ... the image as a binary stream The BinaryWrite( ) method of the HttpResponse object writes a stream of binary characters to the HTTP output stream rather than a textual stream Response.BinaryWrite((byte[])dr["Photo"]);...

Ngày tải lên: 28/10/2013, 18:15

... System.Data.SqlClient; private DataSet ds; private SqlDataAdapter da; private BindingManagerBase bm; // private void DisplayDatabaseImageForm_Load(object sender, System.EventArgs e) { // Create ... that are bound to the same data source so that they display information from the object within the data source, such as a row in a DataTable The BindingContext class is used to instantiate a ... the DataSet ds = new DataSet( ); // Create the DataAdapter and retrieve the Employees table String selectCommand = "SELECT EmployeeID, LastName, FirstName FROM Employees"; da = new SqlDataAdapter(selectCommand,...

Ngày tải lên: 28/10/2013, 18:15

... Displaying Data from a Database Database Architecture Slide Objective To provide an overview of database architecture Lead-in A database is a collection of data that you can sort, search, add ... to a database A site that enables users to search, retrieve, and update data in a database is a data-driven Web site As a result of the enhanced functionality that data-driven Web sites bring about, ... FrontPage 2000 makes it easy to collect and display data on Web pages and create a Web database application In order to use the information in a database on your pages, you need to create a database...

Ngày tải lên: 11/12/2013, 14:15

... Products table into a DataSet Before you can push changes to the database, you must set the InsertCommand, UpdateCommand, and DeleteCommand properties of your DataAdapter with Command objects ... Call Stored Procedures As mentioned in the earlier section "Modifying Rows in a DataTable," you need to create a DataAdapter object and set its SelectCommand, InsertCommand, UpdateCommand, and ... your DataSet, and then call the Update() method of your DataAdapter, the appropriate stored procedure is run to push your changes to the database Let's take a look at how to set the InsertCommand,...

Ngày tải lên: 14/12/2013, 13:15

... a DataRow in a DataTable object Notice that the ProductID to modify is passed as a parameter: public static void ModifyDataRow( DataTable myDataTable, int productID, SqlDataAdapter mySqlDataAdapter, ... how to add a DataRow to a DataTable First, the following code creates a DataSet object named myDataSet and populates it by calling mySqlDataAdapter.Fill(): DataSet myDataSet = new DataSet(); ... DisplayDataRow() are as follows: In AddDataRow() Calling myDataTable.NewRow() myNewDataRow.RowState = Detached Calling myDataTable.Rows.Add() myNewDataRow.RowState = Added Calling mySqlDataAdapter.Update()...

Ngày tải lên: 14/12/2013, 13:15

... SqlDataAdapter da = new SqlDataAdapter(sqlSelect, ConfigurationSettings.AppSettings["Sql_ConnectString"]); DataTable dt = new DataTable( ); da.Fill(dt); // Set up and bind a view with data from ... comprised of the names of the linked server, the catalog, the schema within the catalog, and data object These names are separated with periods If the data sources are going to be accessed frequently, ... from both tables DataView dv = dt.DefaultView; dv.AllowDelete = false; dv.AllowEdit = false; dv.AllowNew = false; dataGrid.DataSource = dv; Discussion Microsoft SQL Server 2000 and later supports...

Ngày tải lên: 14/12/2013, 18:16

... Displaying Data from a Database Database Architecture Slide Objective To provide an overview of database architecture Lead-in A database is a collection of data that you can sort, search, add ... to a database A site that enables users to search, retrieve, and update data in a database is a data-driven Web site As a result of the enhanced functionality that data-driven Web sites bring about, ... FrontPage 2000 makes it easy to collect and display data on Web pages and create a Web database application In order to use the information in a database on your pages, you need to create a database...

Ngày tải lên: 21/12/2013, 19:15

... SqlDataAdapter mySqlDataAdapter = new SqlDataAdapter(); mySqlDataAdapter.SelectCommand = mySqlCommand; DataSet myDataSet = new DataSet(); mySqlConnection.Open(); mySqlDataAdapter.Fill(myDataSet, ... System.Data.SqlClient; class AddModifyAndRemoveDataRowViews { public static void DisplayDataRow( DataRow myDataRow, DataTable myDataTable ) { Console.WriteLine("\nIn DisplayDataRow()"); foreach (DataColumn ... Note You can undo the modification by calling the CancelEdit() method of a DataRowView Removing an Existing DataRowView To remove an existing DataRowView from a DataView, you can call the Delete()...

Ngày tải lên: 24/12/2013, 01:17