data analysis of hla sequencing using assign sbt v3 6 from conexio

... evolution Nature 2002, 420 :66 4 -66 6 Genome Biology 2007, 8:201 http://genomebiology.com/2007/8/1/201 Genome Biology 2007, 44 Imhof M, Schlotterer C: Fitness effects of advantageous mutations in ... 54 :68 6 -69 1 50 Green RE, Krause J, Ptak SE, Briggs AW, Ronan MT, Simons JF, Du L, Egholm M, Rothberg JM, Paunovic M, et al.: Analysis of one million base pairs of Neanderthal DNA Nature 20 06, ... Studying the basis of clonal interference by whole-genome sequencing Herring et al [8] sequenced clonal samples from their populations after 44 days Sequencing of many clones from each population...

Ngày tải lên: 14/08/2014, 17:22

... (32)  −EI 2EI  θ M 3l2 3l3 And from a numerical point of view, the stiffness matrix is an interval matrix: [4033 .68 , 4 369 .68 ] [ 65 54.52, 60 50.52] [ 65 54.52, 60 50.52] [12101.04, 13109.04] (33) ... corresponding to the numerical equation: [4033 .68 , 4 369 .68 ] [ 65 54.52, 60 50.52] [ 65 54.52, 60 50.52] [12101.04, 13109.04] d [−10.2, −9.8] = θ [29.4, 30 .6] (34) The Oettli and Prager lemma gives the ... Modeling, 341–355 I Elishakoff, ed 16 J Rohn, sep 19 96 Checking properties of interval matrices Technical Report 68 6, Institute of Computer Science, Academy of Sciences of the Czech Republic 17 S P...

Ngày tải lên: 12/01/2014, 21:45

... Constraints 6. 2  Data 6. 3  The Nature of Household Investment 6. 4  Wealth and Liquidity Constraints 6. 5  Kinship Networks and Liquidity Constraints 6. 6  Financing Household Investment 6. 7  Conclusion ... In-Kind Transactions 65   4.8  Depreciation of Fixed Assets 66   4.9  Livestock 66 4.10  Loan Payments, Principal Repayments, and Interest Payments 67 4.11  Examples 68 Part III  Household ... 96 102 109 114 151 1 56 158 Appendix:  Examples of Financial Statements References Index 165 179 185 Preface This monograph emerged from our efforts to study the behavior of the households from...

Ngày tải lên: 07/03/2014, 15:20

... FEBS Journal 2 76 (2009) 68 71 68 79 ª 2009 The Authors Journal compilation ª 2009 FEBS 68 75 Analysis of signaling networks using protein arrays H Voshol et al 68 76 A Controls Line profile (as depicted ... utilizing the planar waveguide FEBS Journal 2 76 (2009) 68 71 68 79 ª 2009 The Authors Journal compilation ª 2009 FEBS 68 73 Analysis of signaling networks using protein arrays A H Voshol et al B MEK ... modulation of regulatory networks [5 ,6] A direct benefit of such an approach would be the early recognition of ‘off target’ and side effects of drug candidates [7], as well as the identification of putative...

Ngày tải lên: 16/03/2014, 00:20

... for the data analysis of LoC data Finally, Section is presenting an emulation of these architectures as well as performance evaluation results, and Section shows the processing of the data of a ... mutation The data analysis (of normalized values) was carried out using the proposed architecture and allowed the selection of a number of probe pairs suitable for the detection of 18 of the 20 ... MICROARRAY DATA ANALYSIS We describe and evaluate in detail the two alternative architectures of the single-core and multicore approach Also, the details for the data analysis of the microarray of a...

Ngày tải lên: 21/06/2014, 22:20

... 12.5% 994 160 16. 1% 1 46 14.7% 79 7.9% 65 6. 5% Total genes In total, we screened 1, 061 wells, 1,042 dsRNAs, 994 genes and found 160 genes with phenotypes *The number and percentage of genes identified ... types, nearly twice as many of the genes were found to have a detectable RNAi phenotype in S2R+ cells (1 46/ 160 genes, or 91% of the total) as in Kc 167 cells (79/ 160 ; 49% of the total) Genes identified ... fewer than half the normal number of cells per image) in 43% of cases (68 / 160 genes; see Additional data file with the online version of this article) Less than 1% of the genes screened caused a...

Ngày tải lên: 06/08/2014, 18:20

... water 0 .66 2 ± 0.012 Sea water 171.700 ± 0.3 86 97.0000 ± 0.133 0 .66 28 ± 0.0002 179.700 ± 0.3 86 0.378 ± 0.002 Soybean 2. 068 ± 0.258 2.1400 ± 0.272 2.070 ± 0.257 Oranges 9.441 ± 0 .66 8 8 .66 10 ± 0 .69 1 ... 0.9994 ( 96. 9–104.7) ± 3.9 Mineral water 0.494 0.9794 (93.7–101 .6) ± 4.3 0 .68 6 0.9719 (98.4–1 06. 2) ± 4.1 Orange 0 .68 4 0.97 76 (84.7–100.1) ± 6. 0 0.847 0.9999 ( 96. 3–1 06. 8) ± 5.3 Soybean 0.4 26 0.9898 ... solution 0.9 56 0.9974 (97.0–100.2) ± 1.0 0. 962 0.9982 ( 95.0–100.5) ± 1.3 Tap water 0.577 0.9543 ( 96. 8–100 .6) ± 2.0 0.7 96 0.9919 (98.1–1 06. 0) ± 4.1 Sea water 1.0 06 0.9993 ( 86. 1–104 .6) ± 5.8 0.989...

Ngày tải lên: 07/08/2014, 14:20

... (0 .61 ) 6. 61 (3.44) 0.79 0.00 0.00 TF1 7.05 (0.17) –5.40 (1.27) 11.20 (5.77) 1. 16 0.00 2.03 TF2 6. 44 (0.12) –5. 46 (0.72) 11.14 (3.48) 1.15 0.00 3.21 RP2 6. 66 (0.15) –5.89 (0.91) 12. 26 (4.17) 1. 16 ... reflectance in the NIR and SWIR regions of the spectrum Analysis of vegetation spectra 519 Figure Summary of F-ratio tests of significance of the variance of the reflectance associated with a specific ... 1. 16 0.00 3.58 C1 7.22 (0.19) –5.74 (1.35) 11.41 (6. 26) 1.10 0.00 3.20 C2 6. 47 (0.11) –5.25 (0 .64 ) 6. 94 (3 .60 ) 0.79 0.00 0.00 AA 7.59 (0.01) –5 .62 (0.04) 9.19 (0.18) 0.93 0.89 0.00 MG 7.58 (0.03)...

Ngày tải lên: 08/08/2014, 01:22

... estimate of leaf area index from transmittance of the sun’s beam, Agric For Meteorol 41 (1987) 179-1 86 [14] Lang A.R.G., Xiang Yueqin Y., Estimation of leaf area index from transmission of direct ... the spatial dispersion of data only The rise observed from curve to curve illustrates the importance of the directional variability of the gap fraction According to the size of the azimuth sectors, ... Chen J.M., Cihlar J., Plant canopy gap size analysis the- plant canopies ory for improving optical measurements of leaf area plant canopies, Appl Optics 34 (1995) 62 11 -62 22 index of [8] Chen J.M.,...

Ngày tải lên: 08/08/2014, 14:21

... No (%) No (%) Pa ORa 95% CIa HLA DR3-DQ2-C4AQ0 61 (43) 42 (21)

Ngày tải lên: 09/08/2014, 01:24

... the square root of the sum of squares of the displacements seen in the directions was calculated The amount of isocenter shift of serial CT scans was assessed using analysis of variance (ANOVA) ... isocenter of 0.7 and 2.5 mm, respectively Willner et al [15] reported a mean 3D displacement of 2.4 mm and SD of 1.3 mm, and similar results have been shown by others [6, 14, 16, 19] Using a bite ... Repositioning accuracy of fractionated stereotactic irradiation: assessment of isocentre alignment for different dental fixations by using sequential CT scanning Radiother Oncol 2005, 74 :61 -66 20 Solberg...

Ngày tải lên: 09/08/2014, 10:20

... file we list approximately 6, 600 candidate polymorphic HpaII sites, of which examples are shown in Figure 5, confirmed by targeted resequencing of those loci The 6, 600 loci were selected based ... methylation data for that sample The development of analytical pipelines to support analysis of these datasets will be critical to the success of these projects, while the careful ongoing assessment of ... [http://www.urogene.org/methprimer/] doi: 10.11 86/ gb-2010-11-4-r 36 Cite this article as: Suzuki et al., Optimized design and data analysis of tagbased cytosine methylation assays Genome Biology 2010, 11:R 36 Page 11 of 11 ...

Ngày tải lên: 09/08/2014, 20:21

Ngày tải lên: 29/11/2014, 06:59

... instruments of data collection and methods of data analysis Chapter 3: Presentation and analysis of data Chapter four presents the statistical results and the analysis of the collected data Part ... of overview of the study, the participants, instrument of data collection and methods of data analysis of the study in detail 2.1 Overview This paper is devoted to investigating the misuses of ... High School, from my observation, often make errors in using articles in writing As an English language teacher, the researcher is aware of the importance of the error analysis in using articles...

Ngày tải lên: 28/03/2015, 09:22

... range with a best straight line slope of 2. 56, an intercept of 28.54 and a correlation coefficient of 0.9 96 The results of the analysis of some authentic samples of hydrogen peroxide are shown in ... Complexing Coil Figure 60 6 60 8 Waste A schematic diagram of the manifold used for the presented work Flow injection analysis of some oxidants using spectrophotometric detection Figure 60 1 Calibration ... Sample D 96. 7 96. 3 Figure 60 5 Calibration measurements of 2–8 · 10À5 M H2O2 and some authentic samples 60 6 I.Z AL-Zamil et al Figure Table Calibration graph for the determination of 2–10 · 10À4...

Ngày tải lên: 02/09/2015, 13:46

... 0. 068 0.252 0.103 0.304 0.205 0.404 0. 163 0.370 0. 065 0.2 46 0.222 0.4 16 0.4 96 0.500 0 .65 7 0.475 0.320 0. 467 If age

Ngày tải lên: 29/09/2015, 13:01

... between proportions of functional groups and age 26 of forests Figure Relationships between proportions of functional groups and age 27 of forests Figure Correlations of proportions of Opportunist ... provided data in the form of proportional abundance (i.e the 15 proportion or percentage of each species out of the total number of individuals collected) This proportion data was also used for my analysis ... FOREST OF SINGAPORE Introduction The main island of Singapore is located off the southern tip of the Malay Peninsula and most of the island consisted of tropical lowland rain forest for much of the...

Ngày tải lên: 29/09/2015, 13:01

... deleted p 26- full None p 26- ND 36 1– 36 p 26- ND60 1 60 p 26- CD40 153–192 p 26- CD10 183–192 p 26- alpha 1 60 and 153–192 Designations Primer sequences (p 26- 1Bam-s) (p 26- 192Xho-as) (p 26- 36Bam-s) (p 26- 192Xho-as) ... probed with anti-p 26 Ig, a procedure repeated for each heat shock experiment 1, p 26- full; 2, p 26- ND 36; 3, p 26- ND60; 4, p26CD40; 5, p 26- CD10; p 26- alpha Fig Centrifugation of p 26 in sucrose gradients ... cDNAs include: p 26- full, the full-length p 26 cDNA; p 26- ND 36, lacks N-terminal residues 1– 36; p 26- ND60, lacks N-terminal residues 1 60 ; p 26- CD40, lacks C-terminal residues 153–192; p 26- CD10, lacks...

Ngày tải lên: 22/02/2014, 04:20

... was assumed (K2 0 .66 7 [30]) A value of 1. 36 was taken for the refractive index n [31] MALDI-TOF analysis MALDI-TOF analysis of the peptides obtained after tryptic digestion of the labeled and ... characteristics of the covalently attached dyes, Cys 66 is located in a hydrophobic environment and is partially accessible to external solvent molecules In spite of its high reactivity Cys 66 is not a part of ... full saturation of the protein binding sites Changes in the specific emission of the fluorescent probe IAEDANS (kexc 360 nm), covalently attached to Cys 66 of Ag-NPA-1 upon binding of palmitate, were...

Ngày tải lên: 16/03/2014, 18:20

... classic/constrained 0.87/0.94 0.79/0.73 0. 86/ 0.95 Camera classic/constrained 0 .65 /0. 86 0 .60 /0.45 0 .67 /0.81 reduce the amount of pairs very efficiently, so even large data sets can be handled At last, pruning ... level of variability present in the data In this paper we present a CSI mixture model-based clustering of a data set of ADHD patients that consists of both genotypic and phenotypic features The data ... Proceedings of the 6th International Conference On Knowledge Discovery and Data Mining (KDD-2000) NEILING, M (2005): Identification of Real-World Objects in Multiple Databases In: Proceedings of GfKl...

Ngày tải lên: 05/08/2014, 21:21