b crystal structure of 2 7 di 2 hydroxyethoxy naphthalene

... terpyridines The syntheses of (L1), - (2- hydroxyethoxy) -2, 2 :6 ,2 -terpyridine hydroxyethoxy) ethoxy] -2, 2 :6 ,2 -terpyridine (L2) and - [2- (2- - {2- [2- (2- hydroxyethoxy) ethoxy]ethoxy} -2, 2 :6 ,2 -terpyridine ... N2 O N O O N T3 T5 N 2, 3-[Bis (2, 2′:6′ ,2 -terpyridin-4′-yl)-1,4dioxabutyl ]naphthalene (L16) 2, 3-[Bis (2, 2′:6′ ,2 -terpyridin-4′-yl)-1,4,7trioxaheptyl ]naphthalene (L 17) The atom numbering scheme of ... architectures21 ,22 , including rods2 3 27 , helices28-41, knots 42, catenates 42- 45, rotaxanes46-48, boxes49- 62, grids63 -71 , racks 72 , ladders73, cylinders74, cages75- 82, and dendrimers83-86, has been formed...

Ngày tải lên: 02/07/2014, 13:33

... (20 02) Identification and expression of a cDNA encoding human 6 622 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 a-amino -b- carboxymuconate-e-semialdehyde decarboxylase (ACMSD) J Biol Chem 27 7, 351 62 351 67 ... (%) 2. 0 63 79 4 24 525 0. 124 2. 6 94 Number of protein atoms Number of solvent molecules Number of DHAP ⁄ Zn atoms Number of glycerol atoms R-factor (%) R-free (%) ˚ rmsd bond lengths (A) rmsd bond ... H (20 00) Apoptosis induced by niacin-related FEBS Journal 27 6 (20 09) 6615–6 623 ª 20 09 The Authors Journal compilation ª 20 09 FEBS 6 621 Crystal structure of human ACMSD 10 11 12 13 14 15 16 17...

Ngày tải lên: 18/02/2014, 06:20

... radical from Ó FEBS 20 02 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 Structure of B1 2- dependent glycerol dehydratase (Eur J Biochem 26 9) 4493 coenzyme B1 2: X-ray structure of diol ... (fold) 12 400 11 500 10 500 876 0 77 80 823 376 185 141 119 15.1 30.6 56.8 62. 1 65.4 100 93 85 71 63 2. 0 3.8 4.1 4.3 46 000 24 100 977 0 8450 1 920 23 4 105 70 .6 24 .0 100 93 120 100 52 21 18 4 .2 3.9 ... FEBS 20 02 Structure of B1 2- dependent glycerol dehydratase (Eur J Biochem 26 9) 4489 component B, and that the contaminating component B recombined with the b subunit (component A) to form a 2b2 c2...

Ngày tải lên: 21/02/2014, 03:20

... Yoshizawa et al Structure of Bg7S, a XEGIP-like protein of soybean Structured digital abstract l Bg7S binds to Bg7S by x-ray crystallography (View interaction) l Bg7S binds to Bg7S by cosedimentation ... DASA (A2) AB dimer BC dimer CD dimer DA dimer 1948 No of water molecules 14 62 1493 1 72 7 1511 18 24 25 22 Because structural analysis revealed that Bg7S forms a tetramer with pseudo -22 2 symmetry ... these disulfide bonds supposedly stabilize the three-dimen- Structure of Bg7S, a XEGIP-like protein of soybean sional structure of Bg7S The Cys209–Cys418 bond seems to be significant for stabilization...

Ngày tải lên: 14/03/2014, 23:20

... (0.199) 26 7 8 42 43 425 98.4 (93 .2) 6 .2 (6.0) 17. 9 (8.6) 20 2. 5 (2. 56 2. 5) 0 .23 6 (0 .25 1) 0 . 27 6 (0 .29 6) 676 1 07 0.015 1.64 a Numbers in parentheses are values for the highest-resolution ˚ ˚ shell: 2. 59 2. 5 ... assessing the accuracy of crystal structures Nature 355, 4 72 475 21 Emsley P & Cowtan K (20 04) Coot: model-building tools for molecular graphics Acta Crystallogr D 60, 21 26 21 32 22 Potterton L, McNicholas ... M (20 07) Substrate recognition by glycoside hydrolase family 74 xyloglucanase from the basidiomycete Phanerochaete chrysosporium FEBS J 27 4, 5 72 7 – 573 6 13 Martinez-Fleites C, Guerreiro CI, Baumann...

Ngày tải lên: 23/03/2014, 05:22

... 0. 979 7 10 )2. 2 P21 ˚ ˚ a = 43.6 A, b = 69 .7 A, ˚ c = 53.9 A, b = 90.9° 57 181 (76 67) 15 72 4 (20 38) 95.4 (99.9) 3.8 (6.1) 23 .94 (16. 62) 99 2. 2 17 .2 ⁄ 25 .4 34.90 34.53 35.66 0.005 ⁄ 0. 020 89.3 ⁄ ... Mesophile Model (1XX2) (41.3) 16 1.40 6.4 4.60 30.9 6 .7 (24 ) 8 .7 2. 8 435 Glu245–Lys181 Glu236–His240 Glu2 72 Arg148 18 2. 24 6 .7 3.00 30 10 4 .7 (19) 5 .7 3 .7 488 Asp85–Arg88 Asp73–Lys75 Glu310–Arg186 ... in 1696 23 24 25 26 27 28 29 30 31 32 33 34 35 psychrophilic, mesophilic, and thermophilic DNA ligases J Biol Chem 27 8, 370 15– 37 023 Bae E & Phillips GN Jr (20 04) Structures and analysis of highly...

Ngày tải lên: 23/03/2014, 07:20

... TEKTRTVPLE YKAQVVIPFN VFWLLKESEL NEDFLADLKV YKIAG 4 37 1 12 1 42 1 72 2 02 2 32 2 62 2 92 322 3 52 3 82 4 12 Figure 28 The sequence of AtCyP38 (83-4 37) The native methionine residues are highlighted in ... (X-1 2B) / ADSC Q210 CCD Resolution (Å) 2. 64 2. 46 Inflection Peak Remote Wavelength (Å) 0. 979 7 0. 979 4 0.9500 Total observations 23 0,354 94 ,78 0 91, 174 96, 420 Unique reflections 14 ,20 9 17, 556 17, 609 ... Figure 26 Crystal of AtCyP38 obtained by vapor batch method in a condition having PEG6000 and t-butanol as precipitants Figure 27 Crystal of selenomethionylated AtCyP38 obtained by vapor batch...

Ngày tải lên: 14/09/2015, 17:50

... 2. 45 2. 48 2. 70 Calcium No Interacting Atoms ASP 65 OD1 ASP 67 O THR 70 O THR 70 OG1 ASP 73 OD1 WAT 69 Distance in Å 2. 59 2. 50 2. 64 2. 58 2. 59 2. 70 Ca 1, the calcium ion, which is coordinated by ... measured distances, Table 2. 3 Table 2. 3 Coordinating atoms of calcium and distances Calcium No Interacting Atoms ASP 44 OD1 ASP 46 OD1 ASP 48 OD1 ILE 50 O ASP 52 OD2 WAT 27 Distance in Å 2. 47 2. 49 2. 50 ... (RMSD) of 2. 79 Å RMS differences for the individual domains(all atoms) have been calculated by using the program TM-align (Zhang et al, 20 05) and have values of 2. 52, 1 .78 and 2. 43 Å for the A, B...

Ngày tải lên: 16/09/2015, 08:31

... 0 . 27 17 ± 2. 0 ± 0.1 0.09 168 ± 19 21 ± 0.13 50 ± 16 2. 6 ± 0 .2 61 ± 2. 7 ± 0.1 FEBS Journal 27 8 (20 11) 22 83 22 95 ª 20 11 The Authors Journal compilation ª 20 11 FEBS J P Kallio et al Crystal structure ... increases A typical feature of basidiomycete laccases is FEBS Journal 27 8 (20 11) 22 83 22 95 ª 20 11 The Authors Journal compilation ª 20 11 FEBS 22 89 Crystal structure of a Thielavia arenaria laccase ... studies of the fungal laccase from Cerrena maxima J Biol Inorg Chem 11, 963– 973 FEBS Journal 27 8 (20 11) 22 83 22 95 ª 20 11 The Authors Journal compilation ª 20 11 FEBS 22 93 Crystal structure of a Thielavia...

Ngày tải lên: 14/02/2014, 18:20

... NLS binding J Biol Chem 27 5, 21 218 21 223 Kobe B (1999) Autoinhibition by an internal nuclear localization signal revealed by the crystal structure of mammalian importin alpha Nat Struct Biol ... by importin-alpha J Biol Chem 27 8, 27 981– 27 9 87 23 Tarendeau F, Boudet J, Guilligay D, Mas PJ, Bougault CM, Boulo S, Baudin F, Ruigrok RW, Daigle N, Ellenberg J et al (20 07) Structure and nuclear ... Por SB, Robbins JM, Warton K, Bootcov MR, Schofield PR, Campbell TJ & Breit SN (19 97) Molecular cloning and expression of a chloride ion channel of cell nuclei J Biol Chem 27 2, 125 75 – 125 82 28 Hu...

Ngày tải lên: 14/02/2014, 19:20

... aerobic hyperthermo- FEBS Journal 27 8 (20 11) 598–609 ª 20 10 The Authors Journal compilation ª 20 10 FEBS 6 07 Crystal structure of SOD from A pernix K1 17 18 19 20 21 22 23 24 25 26 27 608 T Nakamura ... 6984 29 630 31.86–1.35 (1.38–1.35) 1 529 91 (10838) 18.8 (23 .9) ⁄ 20 .3 (25 .4) 0.008 1. 170 6 823 18 73 4 49 .75 –1.48 (1. 52 1.48) 113539 (79 65) 22 .6 (29 .5) ⁄ 25 .6 ( 32. 7) 0.0 12 1.3 82 6855 10 4 17 24 .5 ... (NE2) B WAT H169 (NE2) D165 (OD2) H79 (NE2) WAT H31 (NE2) C WAT D165 (OD2) H169 (NE2) H79 (NE2) H31 (NE2) D E FEBS Journal 27 8 (20 11) 598–609 ª 20 10 The Authors Journal compilation ª 20 10 FEBS 603...

Ngày tải lên: 14/02/2014, 22:20

... domain FEBS Journal 27 7 (20 10) 128 4– 129 6 ª 20 10 The Authors Journal compilation ª 20 10 FEBS 128 5 Crystal structure of Klebsiella phytase PhyK A K Bohm et al ¨ B Fig Crystal structure of Klebsiella ... 81 .71 122 .93 20 5.40 335 330 5.1 18.0 (5.35) 98.1 (81 .2) 8 .2 (24 .5) 94.5–1.68 1 07 604 5643 (5.0%) 17. 98 ⁄ 20 .63 49 .2 2. 57 62 78 7 3356 (5.1%) 19.90 ⁄ 24 .30 70 81 804 – 23 .38 12 516 181 – – – 16 24 .11 ... structure of Klebsiella phytase PhyK A Tyr249 Thr2 92 K Bohm et al ¨ Tyr249 Thr2 92 Asp291 Asp291 Arg24 Arg24 Asn209 His290 Arg100 Asn209 Arg100 Arg28 Arg28 Thr31 B Thr31 C Fig Schematic overview of the...

Ngày tải lên: 16/02/2014, 09:20

... inhibited with benzamidine, concentrated to mgÆmL)1 and subjected to FEBS Journal 27 4 (20 07) 21 48 21 60 ª 20 07 Max-Planck-Insitute of Biochemistry Journal compilation ª 20 07 FEBS 21 57 Crystal structure ... region of known TTSP structures Whereas in the stem regions of FEBS Journal 27 4 (20 07) 21 48 21 60 ª 20 07 Max-Planck-Insitute of Biochemistry Journal compilation ª 20 07 FEBS 21 55 Crystal structure of ... PYMOL [ 32] 21 50 FEBS Journal 27 4 (20 07) 21 48 21 60 ª 20 07 Max-Planck-Insitute of Biochemistry Journal compilation ª 20 07 FEBS O J P Kyrieleis et al Crystal structure of the catalytic domain of DESC1...

Ngày tải lên: 19/02/2014, 00:20

... Journal 27 4 (20 07) 3044–3054 ª 20 07 The Authors Journal compilation ª 20 07 FEBS 30 47 Crystal structure of BcZBP from B cereus V E Fadouloglou et al Table Deacetylase activity of the BcZBP protein ... TT15 42 (1UAN.pdb) from Thermus thermophilus [7] and MshB (1Q74.pdb) from FEBS Journal 27 4 (20 07) 3044–3054 ª 20 07 The Authors Journal compilation ª 20 07 FEBS V E Fadouloglou et al Crystal structure ... hydrogen bonded to the strand b6 Dimerization is thus mainly established via formation of two, FEBS Journal 27 4 (20 07) 3044–3054 ª 20 07 The Authors Journal compilation ª 20 07 FEBS 3045 Crystal structure...

Ngày tải lên: 19/02/2014, 00:20

... James MN (20 03) Structural basis of inhibition revealed by a : complex of the two-headed tomato inhibitor-II and subtilisin Carlsberg J Biol Chem 27 8, 24 0 62 24 071 Otwinowski Z & Minor W (19 97) Processing ... the P2¢ residue, probably resulting from different scaffolds of the inhibitors Structures of PRK with inhibitors or sub- Fig Stereo plot illustrating inhibitor binding in subtilases The binding ... 67 99, 163–194 and 27 7 28 1 in VPRK (VPRK numbering) and 34– 123 and 178 24 9 in PRK One of the disulfide bridges in SPRK and VPRK is close to the S2 binding site It anchors a tight loop (see below)...

Ngày tải lên: 19/02/2014, 07:20

... D1 87 R 12 (E 27 87 E48–R80 E50–R 52 D98–K94 D1 12 R1 47 D1 17 R 121 D184–R188 D260–R 12 1THM 2. 77 4.65 3.93 2. 95 2. 75 2. 76 2. 94 3. 02 3. 02 ˚ A ˚ A)a ˚ A ˚ A ˚ A ˚ A ˚ A ˚ A ˚ A D 57 R1 02 D60–R1 02 D188–K 17 ... D188–K 17 E28–K95 D 124 –K153 D188–R 270 D201–R249 E253–R249 D2 57 R 270 D2 57 K 275 2. 97 3.00 3.91 2. 79 3 .20 2. 81 3.41 2. 98 2. 80 2. 78 ˚ A ˚ A ˚ A ˚ A ˚ A ˚ A ˚ A ˚ A ˚ A ˚ A a The criterion of conserved ... deviation (A) 1IC6–1THM 1SH7–1THM 28 1 27 9 26 1 (93%) 120 (43%) 0.84 27 9 27 9 23 8 (85%) 86 (31%) 1 .21 28 1 27 9 24 6 (88%) 93 (33%) 1.11 FEBS Journal 27 2 (20 05) 8 32 845 ª 20 05 FEBS regard to root mean...

Ngày tải lên: 19/02/2014, 16:20

... deviation of ± 4% T brucei T cruzi 20 00 20 00 350 800 65 20 00 150 900 20 0 70 0 HOP Inhibition and site-directed mutagenesis of T brucei gGAPDH In the absence of a 3D structure of a complex of T brucei ... structural differences may be responsible for the extended/bent conformation of inhibitors inside the active site: (a) substitution of Ser2 47 in T cruzi gGAPDH by Ala246 in T brucei gGAPDH; (b) different ... & Westerhoff, H.V (19 97) Glycolysis in bloodstream form Trypanosoma brucei can be understood of the kinetics of the glycolytic enzymes J Biol Chem 27 2, 320 7 321 5 Bakker, B. M., Michels, P.A.M.,...

Ngày tải lên: 20/02/2014, 02:21

... 151.6, 1 07. 6 2. 65 99.9 (99.9)a 315 465 63 426 7. 8 (2. 0) 8 .7 (36.9) 20 .5 23 .6 16404 3 47 0.0 07 1.388 a 32. 2 26 .0 23 .4 87. 9 12. 1 Numbers in parentheses are for the highest resolution shell Ó FEBS 20 03 ... decarboxylase involved in 23 20 A Schutz et al (Eur J Biochem 27 0) ¨ 10 11 12 13 13a 14 15 16 17 18 19 20 21 22 23 24 25 26 indole-3-acetic acid synthesis in Erwiniaherbicola Appl Environ Microbiol ... size of the substrate binding cavity in ZmPDC (Tyr290, Trp3 87 and Trp5 42) , are shown in red Ó FEBS 20 03 3D structure of indolepyruvate decarboxylase (Eur J Biochem 27 0) 23 19 Fig Comparison of...

Ngày tải lên: 20/02/2014, 11:20

... 141.39 75 .23 90 104.5 90 52. 8 1 17. 45 141. 62 75 .15 90 104.0 90 58.0 118.36 141 .20 76 . 12 90 105.4 90 41.0 F 19.9 2. 3 52 579 0 .24 7 0 .29 1 TG 19.9 2. 5 40 379 0 .21 7 0 .25 8 N 19.9 2. 6 35 873 0 . 27 1 0.309 ... 125 111 35 920 98 .2 (99.6) 1 47 22 0 46 819 99.5 (98.6) 11.1 54.6 6.1 3.6 (3.6) 12. 4 49 .2 8 .2 3 .7 (3 .7) 11.9 35.6 8 .7 3.5 (3.5) 13.1 41 .2 5 .7 3.1 (2. 8) 118.08 1 42. 25 74 .25 90 104.1 90 42. 1 1 17. 70 ... allowed (%) Disallowed (%) ˚ Error in coordinate by Luzzati (A) N BL-6A T AR-NW12A G AR-NW12A TG BL-6A 2. 3 10.9 (2. 2) 2. 5 11.0 (2. 1) 2. 6 9.1 (2. 8) 2. 4 8 .7 (1.8) 189 811 52 671 100 (99.9) 149 20 7 40...

Ngày tải lên: 06/03/2014, 09:22

... Helix 12 2 37, 24 0, 24 4 Helix 13 25 5, 25 8, 25 9 ,26 1, 26 2, 26 4, 26 6 16 Helix 14 27 1, 27 5, 27 8 2. 45 Total 38 FEBS Journal 27 2 (20 05) 166– 179 ª 20 04 FEBS C G M Wilson et al Crystal structure of NlpI pendent ... 11 199 20 6 21 2 22 2 12. 9 7. 4 +1 72 . 6 )26 .0 40.4 (pair 5–6) GWNIVEFYLGNISEQTLMERLKADATD 12 13 22 6 24 6 25 0 26 1 19.4 8.6 (TPR4) )158.3 +38 .2 261 (pair 1–6) 14 26 9 28 3 7. 9 – – – – a Defined by by PROCHECK ... most distant interactions between elements of primary FEBS Journal 27 2 (20 05) 166– 179 ª 20 04 FEBS structure, and include a hydrogen bond between the backbone carbonyl of Asn263 and the backbone...

Ngày tải lên: 07/03/2014, 16:20