a probabilistic generative model for go enrichment analysis

... buffer placed against a rigid wall and used to attenuate earthquake-induced dynamic loads The seismic buffer is modelled as a linear elastic material and the soil wedge shear surface by a stress-dependent ... system For clarity only the peak values from the input acceleration–time records for each numerical simulation are plotted in Figs 9a, 10a, 11a and 12a These data are taken from accelerations ... a very stiff aluminium bulkhead (wall) rigidly attached to the shaking table platform (2.7 m  2.7 m in plan area) A compressible EPS layer of thickness 0.15 m was attached to the wall The wall

Ngày tải lên: 18/05/2021, 17:26

... Synchronous Tree-Adjoining Grammars Andreas Maletti Universitat Rovira i Virgili Avinguda de Catalunya 25, 43002 Tarragona, Spain. andreas.maletti@urv.cat Abstract A characterization of the expressive ... chapter 9, pages 116–150. Addison Wesley. David Chiang. 2005. A hierarchical phrase-based model for statistical machine translation. In Proc. ACL, pages 263–270. Association for Computa- tional ... (2006) we assume that all adjunctions are mandatory; i.e., if an aux- iliary tree can be adjoined, then we need to make an adjunction. Thus, a derivation starting from an initial tree to a derived

Ngày tải lên: 17/03/2014, 00:20

... the argument above, this means that the indirect speech act analysis will always occur in a metaplan to the task plan. This makes sense since the ISA analysis is a communicative phenomena. As ... discourse models. To allow plans about plans, i.e., metaplans, we need a vocabulary for referring to and describing plans. Developing a fully adequate formal model would be a large research effort ... the plan. The parameters of a plan are the parameters in the header. Associated with each plan is a set of constraints, which are assertions about the plan and its terms and parameters.

Ngày tải lên: 17/03/2014, 19:21

... program is also utilized to create the aggregated data in addition to Flexagg7 or GTAPAgg7 program (used to make the aggregated data for Vietnam case). As a matter of fact, users can use programs ... model are mainly taken from the GTAP 7 Data Base which is in the file named as BASEDATA.HAR and GSDVOL.HAR. Since the data structure of GTAP-E are not similar to that of the Standard GTAP, GEMPACK ... Standard GTAP model and the GTAP-E model 2.1. The Standard GTAP model The standard GTAP model describes accounting relations and behavioral equations of households and firms in each region as

Ngày tải lên: 26/03/2014, 14:07

... mentions are not coreferent, e.g., ψ : M × M × {0, 1} →  381 Jamie,Callan, Jamie,Callan, J.,Callan, J.,Callan, J.,Callan, J.,Callan, Jamie,Callan, Jamie,Callan, v, Jamie,Callan, J.,Callan, v,v,v, J.,Callan, J.,Callan, J.,Callan, J.,Callan, Jamie,Callan, Figure ... we can compare running times for any desired level of accuracy. For example, on the 145k men- tion dataset, at a 60% accuracy level the hierarchical model is 19 times faster and at 90% accuracy ... term q(y|y  )/q(y  |y) is optional, and usually omitted. Moves that reduce model score may be accepted and an optional temperature can be used for annealing. The primary advantages of MH for coreference are (1) only

Ngày tải lên: 30/03/2014, 17:20

... resultant category, c is a candidate category for classification, and p(c) is the prior probability of category c, which is calculated as the ratio of training image of category c to all candidate ... saturate at K = 5 (Caltech) and 7 (Pascal). We can understand this because the appearance variation of objects for Pascal is larger than that for Caltech. However, we can choose K = 5 as a constant ... “discrimina- tive approach (discriminative model + discriminant function)” [10]. This advantage comes from the fact that the constellation model is a generative model. A generative model makes a model

Ngày tải lên: 21/06/2014, 16:20

... employ a computable mechanical analog model of a neural oscillator for implementing force–feedback interaction. A linear-only version of the mechanical analog model was proposed ear- lier by Claude ... oscillator model developed by Edward Large for sim- ulating rhythm perception. Using a mechanical analog parameterization, we derive a force–feedback model structure that enables a human to share ... (eberdahl@ccrma.stanford.edu) Claude Cadoz (Claude.Cadoz@imag.fr) Nicolas Castagne (Nicolas.Castagne@imag.fr) ISSN 1687-4722 Article type Research Submission date 20 April 2011 Acceptance date

Ngày tải lên: 21/06/2014, 17:20

... Association, Banff, Canada, September 1995 A Chaigne and A Askenfelt, “Numerical simulations of struck strings I A physical model for a struck string using... E Hall and A Askenfelt, Piano ... condition for the string motion—was modeled using a signal-based nonlinear model. Theadvantagesofsuchahybridmodelarenumerous: (i) it is simple enough so that the parameters can be accu- rately estimated ... another approach that couples two digital waveguides through real gain ampli- fiers. In that case, the coupling is the same for each partial, and the time behavior of the partials is similar. For

Ngày tải lên: 23/06/2014, 01:20

... test males model castrates model 653 10 11 12 13 week of test males data castrates data males model castrates model Figure Course of weekly means of daily feed intake (kg) for males and castrates ... different modelling of the residual variance was judged based on phenotypic daily variances Model estimates calculated as shown above were compared to phenotypic daily variances calculated from data ... combination of data sets (French Landrace and Large White) and models (constant and variable residual variance), four Gibbs chains were run, with 250 000 samples each 2.4 Post-Gibbs analysis

Ngày tải lên: 09/08/2014, 18:21

... Marie-Noëlle Lelay-Taha 1 , Audrey Brisebarre 1 , Florian Atger 1 , Thierry Gostan 1 , Michaël Weber 1 , Guy Cathala 1 and Thierry Forné 1* Abstract Background: Despite its critical role for mammalian gene ... 3C-real-time quantitative PCR (qPCR) protocol [17,18], combined with appropriate algorithms for accurate data normalization [19], provides a powerful quantitative method that allows high-resolution analysis ... plotted all the data into a single graph (Figure 2a). Sta- tistical analyses indicated a significant increase of random collision frequencies for site separations around 100 kb compared to those around

Ngày tải lên: 09/08/2014, 22:24

... data is usually available, because it enables all the data to be used efficiently for training the classification model and testing its predictive performance. For n available input– output data, ... Bayesian model was evaluated using the Hosmer-Lemeshow χ 2 statistic [15]. Finally, testing data were used to evaluate the model's generalization capacity. All com- puter calculations for ... testing data was 0.73. The discrimination capacity of the PC model was, therefore, clearly worse than that of the Baye- sian model: the Metz test for ROC area comparison indicated high statistical

Ngày tải lên: 12/08/2014, 23:24

... pneumococcal polysaccharide vaccine (64% [21]) was seen as the absolute maximum attainable vaccine coverage rate for the vaccine against HZ Thus, the selected rate of 40% was perceived to be an attainable ... [11] A probabilistic sensitivity analysis (PSA) was also performed and several parameters were included In particular, HZ vaccine efficacy was tested by varying the base efficacy using a beta distribution ... vaccine arm and therefore represents a conservative approach A sensitivity analysis which varied all health care costs 20% above and below their base case value found that this had minimal impact

Ngày tải lên: 13/08/2014, 11:22

... from the plasma, extravasation into the extracellular space, and cellular uptake all act over different time-scales A mathematical model by El-Kareh and Secomb [3] took this into account and explicitly ... extracellular, albuminbound extracellular, and intracellular drug concentration as four separate variables Plasma drug concentration is determined according to a 3-compartment pharmacokinetics model, based ... reported similar pharmacokinetic parameters for a 3-compartment model for 21 individual patients Therefore, I use the following 3-compartment model for plasma concentration that can be described

Ngày tải lên: 13/08/2014, 16:20

... have higher accuracy than linkage analysis, but it is less robust to spurious association [12] An analysis that combines the LD and CS information (LDCS analysis) has higher accuracy than LA analysis ... These analyses that capture the information from LD markers for mapping and genetic evaluation are called population-based association or linkage disequilibrium (LD) analyses Association analysis ... analysis and increased computational cost of multiallelic analysis, biallelic analysis can be a good approximation that computationally easier and more feasible The BGF model, however, can be extended

Ngày tải lên: 14/08/2014, 13:21

... H!&dquo;. [...]... out a linear model analysis when the situation dictates a nonlinear analysis, or a transformation of the data Clearly, is so variance), u 2 Q = A linear one-way ... computed by Laplacian integration (Tempelman and Gianola, 1993) using a Fortran program that incorporated a sparse matrix solver, SMPAK (Eisenstat et al, 1982) and ITPACK subroutines ... otherwise. For example, threshold models have been suggested for genetic analysis of categorial traits, such as calving ease (Gianola and Foulley, 1983; Harville and Mee,

Ngày tải lên: 14/08/2014, 19:22

... Kobayashi D, Shimada A, Toyoda A, Kuroki Y, Fujiyama A, Sasaki T, Shimizu A, Asakawa S, Shimizu N, Hashimoto S, Yang J, Lee Y, Matsushima K, Sugano S, Sakaizumi M, Narita T, Ohishi K, Haga S, ... fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype Nature 2004, 431:946-957 Kasahara M, Naruse K, Sasaki S, Nakatani Y, Qu W, Ahsan B, Yamada T, Nagayasu Y, Doi K, Kasai Y, ... KR, UG, KS, MaS, AC, CE and MP contributed to writing the manuscript All authors read and approved the final manuscript Additional data files The following additional data are available with the

Ngày tải lên: 14/08/2014, 21:20

... such as the Asian Banker, Global Trader review and Asian Banking and Finance and Alpha South East Asia. Techcombank has more than 3 million customers to use personal financial service such as ... their banking accounts and change to another bank. Regarding to the less loyalty of Vietnamese customers table, the reason is there are many banks in Viet Nam while Australia and Japan, for example, ... alpha calculation Table 7. KMO and Bartlett's Test Table 8. Total Variance Explained Table 9. Rotated Component Matrix Table 10. Score of Each factor based on customers’ evaluation Table

Ngày tải lên: 24/11/2014, 00:01

... questionnaire survey, clinical and radiographic examinations of recruited patients and information from their dental records Information on patient demographics, post-treatment pain and flare-up and ... who still teaches me what being a true academician means I also thank my colleagues and research advisors Associate Professor Stephen Hsu and Associate Professor Robert Yee for walking with me ... collaborators Dr Shen Liang and Dr Khin Lay Wai who were willing to explain mathematical concepts and patiently worked with me to search for the truth; research assistant Ms Zeng Xiu Qing, for faithfully

Ngày tải lên: 09/09/2015, 08:13

... Carty AJ (2009) Evaluation of rapid cooling and tricaine methanesulfonate (MS222) as methods of euthanasia in zebrafish (Danio rerio) J Am Assoc Lab Anim Sci 48: 785–789 34 Abramoff MD, Magalhaes ... photo mask was drawn in AutoCAD 2011 (Autodesk, Inc., San Rafael, CA, USA) and produced on glass with critical dimensions of mm (IMRE, Singapore) The AutoCAD file is available in the accompanying ... (2009) Olfactory neural circuitry for attraction to amino acids revealed by transposonmediated gene trap approach in zebrafish Proc Natl Acad Sci U S A 106: 9884– 9889 41 Albantakis L, Lohmann C

Ngày tải lên: 09/09/2015, 08:13

... ... countries in Asia such as Thailand, Malaysia, Vietnam and Indonesia are also considering the adoption of EPR laws With the National Waste Policy (2009) in Australia, its government is committing, ... for environmentally weighted recyclability by Huisman 37 Table 2-8: Evaluation scores of the multi -life cycle assessment and analysis by Caudill et al .39 Table 2-9: Evaluation scores for ... and establish a basis for the work.in this thesis A critical review of the state -of- the-art is also provided through evaluating existing methods against... industry and academia as the

Ngày tải lên: 09/09/2015, 11:16