Inferring regulatory signal from genomic data

Inferring regulatory signal from genomic data

Inferring regulatory signal from genomic data

... Regulation 2.4 20 Genomic Regulatory Signal For the purpose of our study, we define Genomic Regulatory Signals as the information contained in DNA sequences that are relevant to the gene regulatory ... Expression Pattern 16 iii 2.4 Genomic Regulatory Signal Inferring Patterns of Gene Expression 22 3.1 Overview 22 3.2 Modifying Boosting for Class Prediction in Microarray D...

Ngày tải lên: 14/09/2015, 14:10

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Báo cáo hóa học: " Research Article Uncovering Gene Regulatory Networks from Time-Series Microarray Data with Variational Bayesian Structural Expectation Maximization" doc

Báo cáo hóa học: " Research Article Uncovering Gene Regulatory Networks from Time-Series Microarray Data with Variational Bayesian Structural Expectation Maximization" doc

... dynamic Bayesian networks formulation, our work has two objectives First, given a set of time-series data from a single experiment, we aim at uncovering the underlying gene regulatory networks ... inferring genetic regulatory interactions from microarray experiments with dynamic Bayesian networks, ” Bioinformatics, vol 19, no 17, pp 2271–2282, 2003 [23] K P Murphy...

Ngày tải lên: 22/06/2014, 19:20

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Báo cáo y học: "Discovery of biological networks from diverse functional genomic data" ppt

Báo cáo y học: "Discovery of biological networks from diverse functional genomic data" ppt

... networks from diverse genomic data lies in the heterogeneity and high noise levels in large-scale data sets High-throughput data by nature are often noisy and simple combinations of results from ... network discovery Previous work in identifying groups of genes involved in specific biological pathways from interaction networks has focused on mainly binary http://genomebiol...

Ngày tải lên: 14/08/2014, 16:20

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Báo cáo y học: "The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo" pptx

Báo cáo y học: "The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo" pptx

... 393 AND AND AND AND AND tfbf AND 451 AND AND 355 AND 195 99 AND AND AND idr2 192 AND 342 VNG0040C nusa AND AND AND 320 284 23 AND AND AND ANDAND VNG2163H AND AND 421 AND AND AND VNG0826C AND AND ... AND 321 AND AND AND 378 300 33 455 317 AND AND AND AND AND oxygen AND AND AND 448 rad3b AND 326 82 441 AND VNG5050H AND AND 10 AND AND AND 259 AND 193 AND 345 313 296 AND AND AND 39 AND 428 AND .....

Ngày tải lên: 14/08/2014, 16:21

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Báo cáo y học: "Inferring transcriptional modules from ChIP-chip, motif and microarray data" pptx

Báo cáo y học: "Inferring transcriptional modules from ChIP-chip, motif and microarray data" pptx

... 'cell cycle regulators': ACE2_YPD, FKH1_YPD, FKH2_H2O2Hi, FKH2_H2O2Lo, FKH2_YPD, MBF1_YPD, MBP1_H2O2Hi, MBP1_H2O2Lo, MBP1_YPD, MCM1_Alpha, MCM1_YPD, NDD1_YPD, RFX1_YPD, RPN4_YPD, STB1_YPD, SWI4_YPD, ... similarity analysis Representative examples from the module content similarity analysis The significance of the similarity in module content between ReMoDiscovery seed modules and GRAM [...

Ngày tải lên: 14/08/2014, 16:21

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Tài liệu Combining Data in Tables from Heterogeneous Data Sources docx

Tài liệu Combining Data in Tables from Heterogeneous Data Sources docx

... SqlDataAdapter da = new SqlDataAdapter(sqlSelect, ConfigurationSettings.AppSettings["Sql_ConnectString"]); DataTable dt = new DataTable( ); da.Fill(dt); // Set up and bind a view with data from ... shown in the sample will improve performance For more information about using linked servers, see Microsoft SQL Server Books Online Ad-hoc connector names allow data from heterogeneous...

Ngày tải lên: 14/12/2013, 18:16

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Tài liệu Báo cáo khoa học: Crystal structure of importin-a bound to a peptide bearing the nuclear localisation signal from chloride intracellular channel protein 4 ppt

Tài liệu Báo cáo khoa học: Crystal structure of importin-a bound to a peptide bearing the nuclear localisation signal from chloride intracellular channel protein 4 ppt

... A2 for main-chain atoms, 35.7 A2 for side-chain ˚ overall (3 244 atoms) For the pepatoms and 33.8 A tide, B factors are slightly higher than those for ˚ ˚ importin -a: 36.9 A2 for main-chain atoms, ... atoms, 40 .2 A2 for ˚ overall (62 total atoms) side-chain atoms and 38.7 A Electron density analysis Both the main-chain and side-chain atoms of the modelled CLIC4 peptide...

Ngày tải lên: 14/02/2014, 19:20

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Tài liệu Báo cáo khoa học: "Improving Automatic Speech Recognition for Lectures through Transformation-based Rules Learned from Minimal Data" ppt

Tài liệu Báo cáo khoa học: "Improving Automatic Speech Recognition for Lectures through Transformation-based Rules Learned from Minimal Data" ppt

... modelling for automatic lecture transcription In Proc 10th EuroSpeech / 8th InterSpeech, pages 2353–2356 H Nanjo and T Kawahara 2003 Unsupervised language model adaptation for lecture speech recognition ... applications to automatic speech recognition IEEE Trans Speech and Audio Processing, 13(4):504–511 E K Ringger and J F Allen 1996 Error correction via a post-processor f...

Ngày tải lên: 20/02/2014, 07:20

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Tài liệu Báo cáo khoa học: "Inferring Selectional Preferences from Part-Of-Speech N-grams" doc

Tài liệu Báo cáo khoa học: "Inferring Selectional Preferences from Part-Of-Speech N-grams" doc

... in POS N-grams to generate test data for their selectional preferences model, but not to infer preferences Zhou et al (2011) identified selectional preferences of one word for another 384 by using ... words Besides collapsed dependencies, PONG infers inverse dependencies Inverse selectional preferences are selectional preferences of arguments for their predicates, such as a...

Ngày tải lên: 22/02/2014, 03:20

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Báo cáo khoa học: Utilizing logical relationships in genomic data to decipher cellular processes pptx

Báo cáo khoa học: Utilizing logical relationships in genomic data to decipher cellular processes pptx

... appear to affect various inhibitory roles within the cell For instance, thyrotro5115 Utilizing logical relationships in genomic data pin-releasing hormone degradation enzyme (TRHDE), protein tyrosine ... successfully to other types of genomic data? We analyzed logical relationships within microarray expression data, with attention to identifying logical combination...

Ngày tải lên: 07/03/2014, 21:20

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Báo cáo khoa học: "CONTEXTUAL WORD SIMILARITY AND ESTIMATION FROM SPARSE DATA" ppt

Báo cáo khoa học: "CONTEXTUAL WORD SIMILARITY AND ESTIMATION FROM SPARSE DATA" ppt

... Probability distribution estimation from sparse data IBM Technical Disclosure Bulletin, 28:2591-2594 True Frequency Figure 4: Similarity based estimation ('+') and frequency based estimation ('0') for ... search heuristic The estimation method of section requires that we identify the most similar words of a given word w Doing this by computing the similarity between w and...

Ngày tải lên: 08/03/2014, 07:20

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New to Credit from Alternative Data pdf

New to Credit from Alternative Data pdf

... that is 90 days or more overdue 11 New to Credit from Alternative Data The ability of credit grantors to better predict credit- worthiness provides security for the credit industry because it guards ... www.philadelphiafed.org/files/wps/2005/wp05-13 .pdf 12 12 PERC March 2009 Findings from Give Credit Where Credit is Due shows evidence of the extent to which new...

Ngày tải lên: 15/03/2014, 04:20

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Báo cáo khoa học: "Learning the Countability of English Nouns from Corpus Data" ppt

Báo cáo khoa học: "Learning the Countability of English Nouns from Corpus Data" ppt

... target noun vs the number of the head nouns of conjuncts (e.g dogs and mud = PLURAL,SINGULAR ) N of N constructions:2D the number of the target noun (N ) vs the type of the N in an N of N construction ... randomlyselected nouns from the test data, and tested the correlation with the system output This is intended to test the ability of the system...

Ngày tải lên: 17/03/2014, 06:20

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