Approximate matching in genomic sequence data

... Alanine Cysteine Aspartic Acid Glutamic Acid Phenylalanine Glycine Histidine Isoleucine Lysine Leucine Methionine Asparagine Proline Glutamine Arginine Serine Threonine Valine Tryptophan Tyrosine ... classified into two groups: full sequence approximate matching and subsequence approximate matching In this thesis, we confine our attention to sequence approximate matching in...

Ngày tải lên: 11/09/2015, 14:29

... as a parameter available for real-time control, so that a biologist viewing a periodicity characterization of a sequence might subjectively assign a relative weight to each of the autocorrelation ... Journal of Theoretical Biology, vol 118, no 3, pp 295–300, 1986 [23] S Tiwari, S Ramachandran, A Bhattacharya, S Bhattacharya, and R Ramaswamy, “Prediction of probab...

Ngày tải lên: 22/06/2014, 00:20

... appear to affect various inhibitory roles within the cell For instance, thyrotro5115 Utilizing logical relationships in genomic data pin-releasing hormone degradation enzyme (TRHDE), protein tyrosine ... successfully to other types of genomic data? We analyzed logical relationships within microarray expression data, with attention to identifying logical combination...

Ngày tải lên: 07/03/2014, 21:20

... 64.9 68.2 62.6 76.6 81. 9 74.2 73 73.4 73.2 72.2 72.6 72.5 66.6 70.8 12 72 14 28 14 07 14 13 14 22 14 13 14 22 14 19 14 22 14 22 14 19 14 19 14 18 12 36 13 20 21. 5 70.7 73.9 61. 9 82.9 88 .1 84.4 82.2 83.3 83.3 ... CNR1 amino acid sequence of R esculenta (FCNR1) was compared with those of known CNR1s, revealing an amino acid identity ranging from 61. 9% to 88 .1% amon...

Ngày tải lên: 30/03/2014, 08:20

... different peptide sequences among the five strains There are nine unique amino acids in the RNase/ RT of BLV ARG 38 relative to all of the other BLV strains, including BLV ARG41 There are no differences ... terminal repeat nucleic acid sequences of BLV Arg 41 compared to other BLV strains including BLV Arg 38, BLV GAGA, BLVA and BLVCG [17,25,26 ]The consenus sequ...

Ngày tải lên: 12/08/2014, 04:21

... different peptide sequences among the five strains There are nine unique amino acids in the RNase/ RT of BLV ARG 38 relative to all of the other BLV strains, including BLV ARG41 There are no differences ... terminal repeat nucleic acid sequences of BLV Arg 41 compared to other BLV strains including BLV Arg 38, BLV GAGA, BLVA and BLVCG [17,25,26 ]The consenus sequ...

Ngày tải lên: 12/08/2014, 04:22

... TRACKING OF CORONARY ARTERIES IN ANGIOGRAM SEQUENCE BY STRUCTURAL MATCHING OF JUNCTIONS WANG YUMEI (HT080162U) (B.Sc., FUDAN UNIVERSITY, CHINA, 2008) A THESIS SUBMITTED FOR THE DEGREE OF MASTER ... performance of our algorithm 35 Figure 4.5: Tracking result in frame 32 in sequence 36 Figure 4.6: Tracking result in frame 34 in sequence 37 Figure 4.7:...

Ngày tải lên: 12/10/2015, 17:33

... RESEARCH QUESTIONS What are the semantic and syntactic features of English CHAPTER matching verbs? What are their Vietnamese translational equivalents? What are the implications for teaching, learning, ... theoretical background as well as practical evidence The in English and Vietnamese translational equivalents theoretical background on the matching verbs an...

Ngày tải lên: 26/11/2013, 13:18

... ActiveX Database Objects Extensions (ADOX) from COM interop ADOX has a Tables property that exposes a collection of Table objects in the database The user tables are determined by iterating over ... ConfigurationSettings.AppSettings["MsAccess_ConnectString"]); conn.Open( ); // Retrieve schema information for all tables DataTable schemaTable = conn.GetOleDbSchemaTable(OleDbSchemaGu...

Ngày tải lên: 26/01/2014, 10:20

... into V-ing something There are 35 such verb frames in WordNet and a synset may have only one or as many as a half dozen or so frames assigned to it Our mapping of verbs in Levin+ classes to WordNet ... manual tagging and (only) 24 for a second round of more problematic cases.6 While the full tagging of the lexical database may make the automatic tagging task appear sup...

Ngày tải lên: 20/02/2014, 18:20

... status categories Do Minimum Wages Really Reduce Teen Employment? / 217 a 25-quarter window, starting at eight quarters before the minimum wage change and continuing to sixteen quarters after ... refers to the log of the minimum wage; i, s, and t denote, respectively, individual, state, and time indexes; X is a vector of individual Do Minimum Wages Really Red...

Ngày tải lên: 06/03/2014, 21:20

... XMark Instead of storing the entire data as a single, large XML instance, it is more natural in a relational database to store the data in tables representing the different entities in the data ... save space in XML indexes, although it adds a JOIN in case of wildcard and //-axis queries Conclusions This paper introduces techniques for indexing XML instances...

Ngày tải lên: 07/03/2014, 14:20

... supports relational data as well as sequencedata, using a novel design paradigm of enhancedabstractdata types (BADTs ) The systemimplementation basedon this paradigmallows sequence relational queriesto ... PIVceeding of the ACM SIGMOD Conference on Management of Data, May 1994 [CS92] RakeshChandmand Arie Segev.ManagingTemporalFinancial Data in anExtensible Database. In Procee...

Ngày tải lên: 16/03/2014, 16:20

... appearing 0-2 times in the labeled training data, and appearing at least ten times in the HMM’s training data Table contains our results For our POS tagging experiments, we use 561 MEDLINE sentences ... gasolines on newer engines.” In a common dataset for NP chunking, the word “reformulated” never appears in the training data, but appears four times in the test set as part of th...

Ngày tải lên: 17/03/2014, 01:20