Báo cáo y học: " DISTILLER: a data integration framework to reveal condition dependency of complex regulons in" ppsx
Báo cáo y học: " DISTILLER: a data integration framework to reveal condition dependency of complex regulons in" ppsx
... Abeygunawardena N,
Coulson R, Farne A, Holloway E, Kolesnykov N, Lilja P, Lukk M, Mani
R, Rayner T, Sharma A, William E, Sarkans U, Brazma A: ArrayEx-
press - a public database of microarray experiments ... 7:R37.
20. Tanay A, Sharan R, Kupiec M, Shamir R: Revealing modularity and
organization in the yeast molecular network by integrated
analysis of highly heterogeneous genomewide...
Báo cáo y học: "ExpressionPlot: a web-based framework for analysis of RNA-Seq and microarray gene expression data" doc
... Access
ExpressionPlot: a web-based framework for
analysis of RNA-Seq and microarray gene
expression data
Brad A Friedman
1,2,3*
and Tom Maniatis
4
Abstract
RNA-Seq and microarray platforms have ... gene
expression analysis of RNA-Seq and microarray data.
* Correspondence: brad.aaron.friedman@gmail.com
1
Department of Molecular and Cell Biology, Harvard University, 7 Divinity
A...
báo cáo khoa học: " Large-scale data integration framework provides a comprehensive view on glioblastoma multiforme" pot
... large-scale data analysis as well as for the integration
of mult idimensional data with clinical parame ters and
knowledge available in bio-databases. In addition, it is
evident that until data ... facilitates the
integration of various data formats, bio-databases and
analysis techniques. Anduril manages and automates ana-
lysis workflows from importing raw data to reporti...
Báo cáo y học: "ProCAT: a data analysis approach for protein microarrays" pot
... commercially available software pack-
ages for microarray experiments have a built in flagging func-
tion, and ProCAT will automatically discard flagged spots.
A key aspect of ProCAT is the two-parameter ... number of test
arrays and negative control arrays for one particular assay.
Data file format describes the layout in the uploaded dataset
so that ProCAT can recognize and extrac...
Báo cáo y học: " NeMeSys: a biological resource for narrowing the gap between sequence and function in the human pathogen Neisseria meningitid" pot
... chromosomal inversions (Additional data file 1).
To achieve an annotation as accurate as possible, we anno-
tated 8013's genome manually by taking advantage of all the
functionalities of the ... (MaGe) for data visualization and exploration; and
the large Prokaryotic Genome DataBase (PkDGB) for data
storage, which contains more than 400 microbial genomes.
We devoted particula...
Báo cáo y học: "Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences" ppsx
... 6 of 13
are examples of metadata) - to repeat an analysis
exactly. When a user performs an analysis using Galaxy,
it automatically generates metadata for each analysis
step. Galaxy’s metadata ... Galaxy’s history panel pr ovides access to both
automatically tracked metadata and user metadata
(Figure 1) within the analysis workspace, and hence
users can see all reproducibility metada...
Báo cáo y học: "forms a higher order oligomer and enhances ATPase activity of replication initiator protein (Rep/AC1)" ppsx
... experiments:
All_AC3_Fwd: 5'- CATGAGCTCGGATCCATGGAT-
TCACGCACAGGG -3'
All_AC3_Rev: 5'- CCATCTAGACTCGAGTGGCRTG-
TACTCAYGCCTCTAAYCC -3'
ToLCV_AC1_Fwd: 5'- CATGGATCCATGGCHVCYC-
CMAAWCG ... biochemical characterization of the viral protein. The
enhancement of AC1-mediated ATPase activity might lead to increased viral DNA replication.
Background
Tomato leaf curl dis...
Báo cáo y học: "Bispectral index versus COMFORT score to determine the level of sedation in paediatric intensive care unit patients: a prospective study" docx
... To avoid bias by repeating analysis
of data from the same patient, each patient was included only
once in the statistical analysis. In addition, we wished to focus
on the age of the children and ... in accordance with the
COMFORT classification.
Data are expressed as mean ± standard deviation in the case
of a normal distribution and interval scaling level, and as
median (range...
Báo cáo y học: "Establishing a gold standard for manual cough counting: video versus digital audio recording" ppsx
... conditions. As digital
sound recorders have significant advantages over video
recorders, ambulatory digital audio recording should now
provides the gold standard for ambulatory validation of
automated ... therefore not applicable to
clinical practice. Digital audio recording devices have sev-
eral advantages over video. Firstly, long ambulatory
recordings can be made allowing cough monito...
Báo cáo y học: "Relating a calcium indicator signal to the unperturbed calcium concentration time-course" potx
... Henry DI Abarbanel
2
Address:
1
Max-Planck-Institute of Neurobiology, Martinsried, Germany and
2
Department of Physics and Marine Physical Laboratory (Scripps
Institution of Oceanography), ... the optimal estimate of the voltage signal, lead-
ing to a calcium influx and consequently to the optical sig-
nal of bound indicator. Clearly, the advantage of this
method is that...