Báo cáo y học: "ProCAT: a data analysis approach for protein microarrays" pot
Báo cáo y học: "ProCAT: a data analysis approach for protein microarrays" pot
... these artifacts are variable, it is necessary to
manually flag these spots initially and then remove them from
future analysis. Many commercially available software pack-
ages for microarray experiments ... test
arrays and negative control arrays for one particular assay.
Data file format describes the layout in the uploaded dataset
so that ProCAT can recognize and extract the useful i...
Báo cáo y học: "ExpressionPlot: a web-based framework for analysis of RNA-Seq and microarray gene expression data" doc
... [http://www.ebi.ac.uk/ena/
data/ view/ERP000619].
28. Affymetrix - Sample Data, Exon 1.0 ST Array Dataset [http://www.
affymetrix.com/support/technical/sample _data/ exon_array _data. affx].
29. Akira S, Takeda ... Access
ExpressionPlot: a web-based framework for
analysis of RNA-Seq and microarray gene
expression data
Brad A Friedman
1,2,3*
and Tom Maniatis
4
Abstract
RNA-Seq and...
Báo cáo y học: "ChIPOTle: a user-friendly tool for the analysis of ChIP-chip data" docx
... cutoff, 'array density'
of the peak, and the P value for that peak. The array density
value is defined as the average number of arrayed elements
used to calculate the window values for all ... ChIPOTle can estimate the P value for a
region using a permutation-based approach (Additional data
file 2).
Using ChIPOTle
Detailed instructions for the installation and use of...
Báo cáo y học: " DISTILLER: a data integration framework to reveal condition dependency of complex regulons in" ppsx
... (data available upon
request). The data were collected from the three major micro-
array databases: Stanford Microarray Database [39], Gene
Expression Omnibus [40], and ArrayExpress [41]. Addition-
ally, ... framework
DISTILLER to a combination of publicly available microarray
data and regulatory motif data. This allowed us to considera-
bly extend the transcriptional network with nov...
Báo cáo y học: "Getting a buzz out of the bee genome" pot
... it appeared that a relatively recent
duplication had occurred in the ancestors of Lepidoptera
and Diptera around 300 million years ago, and that tim had
evolved rapidly to take on a dedicated ... provide a valuable resource for the detailed
analysis of differences in gene expression between these
castes. Early data from relatively small cDNA libraries
already indicate major differ...
Báo cáo y học: "GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists" ppsx
... operation.
Additional data file 2 contains the results obtained by GENE-
CODIS in the analysis of the yeast and human gene sets. Addi-
tional data file 3 provides a description of a comparative
analysis ... current applications for functional pro-
filing essentially use the same general approach and generate
statistical scores for single annotations. They mainly differ on
as...
Báo cáo y học: "Smoking–gender interaction and risk for rheumatoid arthritis" pot
... overall, disadvantageous to the study because
such an approach would not allow us to study important
interactions between age and other covariates. Unfortu-
nately, data on the temporal sequence ... University, Palo Alto, California, USA
2
Jyväskylä Central Hospital, Jyväskylä, Finland
3
Vanderbilt University, Nashville, Tennessee, USA
Corresponding author: Eswar Krishnan (e-mail: eswar_k...
Báo cáo y học: "The PIRO Concept: O is for organ dysfunction" pot
... It’s
exactly what the people who developed SAPS [Simplified
Acute Physiology Score] and APACHE [Acute Physiology
and Chronic Health Evaluation] really wanted – to try to find a
way to give a global ... more potential you
have to get out of it. Obviously, continuous variables give you
more information than dichotomous variables when you use
statistical analysis, and at this stage we’re st...
Báo cáo y học: "Diet as prophylaxis and treatment for venous thromboembolism" pot
... standard anticoagulants
For a hypothetical example anticoagulant prophylaxis RCTs, consider acutely ill
patients admitted to hospital medical wards. America n Association of C hest Physician
(ACCP) ... FPE rate ma y appear to be the logical primary efficacy endpoint for RCTs
comparing standard anticoagulant prophylaxis and treatment with a low VTE risk diet,
FPE data are unreliabl...
Báo cáo y học: "The intelligence in developing systems for molecular biology" potx
... descriptor arrays for the best separation
through a linear programming formulation. I also described a
data structure that exploits all available memory to search for
all similar small molecules to a ... of a regulatory network by treating it
as a Boolean logic circuit that can work synchronously or
asynchronously. The idea makes a lot of sense, as most of the
available dat...
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