... Forrest A, Van Nimwegen E,Daub C, Balwierz P, Irvine K, Lassman T, Ravasi T, Hasegawa Y, deHoon M, Katayama S, Schroder K, Carninci P, Tomaru Y, Kanamori-Katayama M, Kubosaki A, Akalin A, Ando Y, ... respectively. TheDNA samples were recovered by phenol:chloroform:isoamylalcohol extraction or QIAquick PCR purification kit (Qiagen,Valencia, CA, USA).LM-PCR, array hybridization and analysis of Affymetrix ... further analysis.Co-localization of EGR-1 with histone acetylation and transcription start sites Comparison of ChIP-chip data of EGR-1 with FANTOM4 datasets (see Materials and methods) revealed...