rna–protein interaction protocols

... Biology RNA–Protein Interaction Protocols Edited by Susan R. Haynes VOLUME 118 HUMANA PRESS HUMANA PRESS Methods in Molecular Biology Edited by Susan R. Haynes RNA–Protein Interaction Protocols Joining ... 365, 364–368. RNA–Protein Crosslinking 21 21 From: Methods in Molecular Biology, Vol. 118: RNA-Protein Interaction Protocols Edited by: S. Haynes © Humana Press Inc., Toto...

Ngày tải lên: 11/04/2014, 10:31

... easily gain access to the RNA–protein interface to increase the dissociation process. The promiscuity often reported for proteins M. Doetsch et al. Transient RNA–protein interactions in RNA folding FEBS ... the assembly and functioning of RNP machines, mostly through transient interactions with the RNA. Transient RNA–protein interactions in RNA folding M. Doetsch et al. 1636 FEBS Journa...

Ngày tải lên: 14/02/2014, 19:20

... transient nature of the interaction in solution (Fig. 1). The recent assignment of the NMR spectrum of the PCNA ring [6,7] provides the basis for solution studies of its interactions with DNA and ... electrostatics, as most of the pro- tein–DNA interactions do not involve the bases, but the phosphates and sugars of the DNA backbone [15]. Most of these interactions are preserved in the com-...

Ngày tải lên: 14/02/2014, 19:20

... variety of proteins. This interaction determines their intracellular translo- cation and stability, and also regulates their activities as transcriptional factors. Protein interaction on the ER and ... proteolysis, post-translational modifications and interaction with associated proteins. Here, I review the regulatory mechanisms of SREBP activity through the interaction with various ki...

Ngày tải lên: 18/02/2014, 13:20

... protein– protein interactions when crystal structures are available [21]. An alternative possibility that does not depend on the knowledge of the protein structure is the detection of regions of interaction ... many experimental results have been published, pointing to specific interaction regions in the complex (for review see [31]). Remarkably our predicted interaction sites fit with th...

Ngày tải lên: 21/02/2014, 15:20

Ngày tải lên: 22/02/2014, 23:58

... the locations of the hub protein interactions. Some hub proteins have multiple simultaneous interactions (party hubs), while others have multiple sequential interactions separated in time or ... for organizing protein–protein interaction subnetworks into larger networks. We have presented evidence that ID proteins can play crucial functional roles in protein interaction net- works. This ....

Ngày tải lên: 07/03/2014, 21:20

... for protein–protein interactions. The assay is a valuable tool not only for the screening of new molecules that interact with known bait molecules, but also for con- firming interactions between ... the Bv-FRET assay represents a powerful method for studying protein–protein interactions. This assay can reveal the interaction between GnRH-R mole- cules and the effect of GnRH analogues on this...

Ngày tải lên: 30/03/2014, 20:20

... Effect of Utilizing Terminology on Extraction of Protein-Protein Interaction Information from Biomedical Literature Junko Hosaka  Judice L.Y. Koh  Akihiko Konagaya RIKEN  Institute ... research. We are applying syntactic parsing trained on the general domain to identify protein- protein interactions. One of the main dif- ficulties obstructing the use of language processing is the prevale...

Ngày tải lên: 31/03/2014, 20:20

... Biology TM Edited by Bryan John Smith Protein Sequencing Protocols VOLUME 211 SECOND EDITION Edited by Bryan John Smith Protein Sequencing Protocols SECOND EDITION SDS-PAGE for Protein Sequencing ... P. E., Manning-Krieg, U., and Horst, M. (1993) Desalting electroeluted proteins with hydrophilic interaction chromatography. Anal. Biochem. 215, 292–298. 8. Fierens, C., Thienpont, L. M., S...

Ngày tải lên: 11/04/2014, 07:13